Gene : Glyma.06G159600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10972:SF100 - OXYSTEROL-BINDING PROTEIN HOMOLOG 3 Genomic Order:  1596
Name:  ? Glyma.06G159600 Secondary Identifier:  ? PAC:30549503
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G159600 0.5kb upstream 0.5kb upstream 10929 true Chr06: 13160471-13171399 Glycine max
Glyma.06G159600 0.5kb upstream 0.5kb upstream 500 false Chr06: 13170900-13171399 Glycine max
Glyma.06G159600 0.5kb downstream 0.5kb downstream 10929 true Chr06: 13159971-13170899 Glycine max
Glyma.06G159600 0.5kb downstream 0.5kb downstream 500 false Chr06: 13159971-13160470 Glycine max
Glyma.06G159600 1.0kb upstream 1.0kb upstream 11429 true Chr06: 13160471-13171899 Glycine max
Glyma.06G159600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13170900-13171899 Glycine max
Glyma.06G159600 1.0kb downstream 1.0kb downstream 11429 true Chr06: 13159471-13170899 Glycine max
Glyma.06G159600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13159471-13160470 Glycine max
Glyma.06G159600 2.0kb upstream 2.0kb upstream 12429 true Chr06: 13160471-13172899 Glycine max
Glyma.06G159600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13170900-13172899 Glycine max
Glyma.06G159600 2.0kb downstream 2.0kb downstream 12429 true Chr06: 13158471-13170899 Glycine max
Glyma.06G159600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13158471-13160470 Glycine max
Glyma.06G159600 5.0kb upstream 5.0kb upstream 15429 true Chr06: 13160471-13175899 Glycine max
Glyma.06G159600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13170900-13175899 Glycine max
Glyma.06G159600 5.0kb downstream 5.0kb downstream 15429 true Chr06: 13155471-13170899 Glycine max
Glyma.06G159600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13155471-13160470 Glycine max
Glyma.06G159600 10.0kb upstream 10.0kb upstream 20429 true Chr06: 13160471-13180899 Glycine max
Glyma.06G159600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13170900-13180899 Glycine max
Glyma.06G159600 10.0kb downstream 10.0kb downstream 20429 true Chr06: 13150471-13170899 Glycine max
Glyma.06G159600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13150471-13160470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122297387 5265 Fabidae View MSA
124036009 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.182766 0.0 0.890279 Low High
cufflinks 0.61997 0.0 2.48232   High
cufflinks 0.0644454 0.0 0.252199 Low  
cufflinks 0.0142961 0.0 0.0614212 Low  
cufflinks 0.0105256 0.0 0.0472344 Low  
cufflinks 0.00495432 0.0 0.0261693 Low Low
cufflinks 0.0221833 0.0 0.09174 Low  
cufflinks 0.0168442 0.0 0.0706001 Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low High
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.015     Low  
cufflinks 0.002     Low Low
cufflinks 0.166       High
cufflinks 0.057     Low High
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.007     Low  
cufflinks 0.001     Low Low
cufflinks 0.017     Low  
cufflinks 0.002     Low Low

0 Strain