Gene : Glyma.06G149900 G. max Wm82.a2.v1
Defline:  (1 of 43) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain Genomic Order:  1499
Name:  ? Glyma.06G149900 Secondary Identifier:  ? PAC:30549511
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G149900 0.5kb upstream 0.5kb upstream 3080 true Chr06: 12238755-12241834 Glycine max
Glyma.06G149900 0.5kb upstream 0.5kb upstream 500 false Chr06: 12241335-12241834 Glycine max
Glyma.06G149900 0.5kb downstream 0.5kb downstream 3080 true Chr06: 12238255-12241334 Glycine max
Glyma.06G149900 0.5kb downstream 0.5kb downstream 500 false Chr06: 12238255-12238754 Glycine max
Glyma.06G149900 1.0kb upstream 1.0kb upstream 3580 true Chr06: 12238755-12242334 Glycine max
Glyma.06G149900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12241335-12242334 Glycine max
Glyma.06G149900 1.0kb downstream 1.0kb downstream 3580 true Chr06: 12237755-12241334 Glycine max
Glyma.06G149900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12237755-12238754 Glycine max
Glyma.06G149900 2.0kb upstream 2.0kb upstream 4580 true Chr06: 12238755-12243334 Glycine max
Glyma.06G149900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12241335-12243334 Glycine max
Glyma.06G149900 2.0kb downstream 2.0kb downstream 4580 true Chr06: 12236755-12241334 Glycine max
Glyma.06G149900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12236755-12238754 Glycine max
Glyma.06G149900 5.0kb upstream 5.0kb upstream 7580 true Chr06: 12238755-12246334 Glycine max
Glyma.06G149900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12241335-12246334 Glycine max
Glyma.06G149900 5.0kb downstream 5.0kb downstream 7580 true Chr06: 12233755-12241334 Glycine max
Glyma.06G149900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12233755-12238754 Glycine max
Glyma.06G149900 10.0kb upstream 10.0kb upstream 12580 true Chr06: 12238755-12251334 Glycine max
Glyma.06G149900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12241335-12251334 Glycine max
Glyma.06G149900 10.0kb downstream 10.0kb downstream 12580 true Chr06: 12228755-12241334 Glycine max
Glyma.06G149900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12228755-12238754 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307333 5265 Fabidae View MSA
124070678 5270 Rosid View MSA
123744900 5271 Pentapetalae View MSA
122796091 5272 Eudicot View MSA
122051331 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98026 0.0 21.6008    
cufflinks 2.22461 0.0 6.79492    
cufflinks 7.89562 0.0 27.4459   High
cufflinks 0.562422 0.0 2.45705   Low
cufflinks 2.20722 0.0 8.8385    
cufflinks 8.90306 0.0 30.7177   High
cufflinks 1.10702 0.0 5.62154    
cufflinks 1.81401 0.0 7.80243    
cufflinks 2.82885 0.0 10.5751    
cufflinks 1.634        
cufflinks 36.055     High High
cufflinks 2.513        
cufflinks 1.623        
cufflinks 1.018       Low
cufflinks 15.563     High  
cufflinks 4.28        
cufflinks 30.553     High High
cufflinks 0.529       Low
cufflinks 1.179       Low
cufflinks 3.193        
cufflinks 35.03     High High
cufflinks 3.725        
cufflinks 3.227        
cufflinks 26.731     High High
cufflinks 3.42        
cufflinks 36.82     High High

0 Strain