Gene : Glyma.06G150300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR36814:SF1 - PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC Genomic Order:  1503
Name:  ? Glyma.06G150300 Secondary Identifier:  ? PAC:30549236
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G150300 0.5kb upstream 0.5kb upstream 2072 true Chr06: 12266504-12268575 Glycine max
Glyma.06G150300 0.5kb upstream 0.5kb upstream 500 false Chr06: 12268076-12268575 Glycine max
Glyma.06G150300 0.5kb downstream 0.5kb downstream 2072 true Chr06: 12266004-12268075 Glycine max
Glyma.06G150300 0.5kb downstream 0.5kb downstream 500 false Chr06: 12266004-12266503 Glycine max
Glyma.06G150300 1.0kb upstream 1.0kb upstream 2572 true Chr06: 12266504-12269075 Glycine max
Glyma.06G150300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12268076-12269075 Glycine max
Glyma.06G150300 1.0kb downstream 1.0kb downstream 2572 true Chr06: 12265504-12268075 Glycine max
Glyma.06G150300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12265504-12266503 Glycine max
Glyma.06G150300 2.0kb upstream 2.0kb upstream 3572 true Chr06: 12266504-12270075 Glycine max
Glyma.06G150300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12268076-12270075 Glycine max
Glyma.06G150300 2.0kb downstream 2.0kb downstream 3572 true Chr06: 12264504-12268075 Glycine max
Glyma.06G150300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12264504-12266503 Glycine max
Glyma.06G150300 5.0kb upstream 5.0kb upstream 6572 true Chr06: 12266504-12273075 Glycine max
Glyma.06G150300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12268076-12273075 Glycine max
Glyma.06G150300 5.0kb downstream 5.0kb downstream 6572 true Chr06: 12261504-12268075 Glycine max
Glyma.06G150300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12261504-12266503 Glycine max
Glyma.06G150300 10.0kb upstream 10.0kb upstream 11572 true Chr06: 12266504-12278075 Glycine max
Glyma.06G150300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12268076-12278075 Glycine max
Glyma.06G150300 10.0kb downstream 10.0kb downstream 11572 true Chr06: 12256504-12268075 Glycine max
Glyma.06G150300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12256504-12266503 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306122 5265 Fabidae View MSA
124061914 5270 Rosid View MSA
123739503 5271 Pentapetalae View MSA
122786700 5272 Eudicot View MSA
122046387 5273 Angiosperm View MSA
121346900 5274 Embryophyte View MSA
123425334 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 383.03 0.0 2215.66 High High
cufflinks 213.528 0.0 915.076 High High
cufflinks 53.7317 0.0 186.816 High  
cufflinks 86.1962 0.0 324.716 High  
cufflinks 8.04039 0.0 29.979   Low
cufflinks 13.0876 0.0 43.2967   Low
cufflinks 88.0449 0.0 333.166 High  
cufflinks 63.8137 0.0 229.024 High  
cufflinks 10.5985 0.0 42.455   Low
cufflinks 92.105     High  
cufflinks 6.988     High  
cufflinks 28.378     High  
cufflinks 0.436       Low
cufflinks 0.222       Low
cufflinks 6.071     High  
cufflinks 274.155     High High
cufflinks 1.188       Low
cufflinks 26.25     High  
cufflinks 66.733     High  
cufflinks 286.21     High High
cufflinks 5.736     High  
cufflinks 288.211     High High
cufflinks 217.148     High High
cufflinks 6.909     High  
cufflinks 317.863     High High
cufflinks 2.311        

0 Strain