Gene : Glyma.06G150800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23354:SF67 - TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN Genomic Order:  1508
Name:  ? Glyma.06G150800 Secondary Identifier:  ? PAC:30549611
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G150800 0.5kb upstream 0.5kb upstream 5528 true Chr06: 12294070-12299597 Glycine max
Glyma.06G150800 0.5kb upstream 0.5kb upstream 500 false Chr06: 12299098-12299597 Glycine max
Glyma.06G150800 0.5kb downstream 0.5kb downstream 5528 true Chr06: 12293570-12299097 Glycine max
Glyma.06G150800 0.5kb downstream 0.5kb downstream 500 false Chr06: 12293570-12294069 Glycine max
Glyma.06G150800 1.0kb upstream 1.0kb upstream 6028 true Chr06: 12294070-12300097 Glycine max
Glyma.06G150800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12299098-12300097 Glycine max
Glyma.06G150800 1.0kb downstream 1.0kb downstream 6028 true Chr06: 12293070-12299097 Glycine max
Glyma.06G150800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12293070-12294069 Glycine max
Glyma.06G150800 2.0kb upstream 2.0kb upstream 7028 true Chr06: 12294070-12301097 Glycine max
Glyma.06G150800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12299098-12301097 Glycine max
Glyma.06G150800 2.0kb downstream 2.0kb downstream 7028 true Chr06: 12292070-12299097 Glycine max
Glyma.06G150800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12292070-12294069 Glycine max
Glyma.06G150800 5.0kb upstream 5.0kb upstream 10028 true Chr06: 12294070-12304097 Glycine max
Glyma.06G150800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12299098-12304097 Glycine max
Glyma.06G150800 5.0kb downstream 5.0kb downstream 10028 true Chr06: 12289070-12299097 Glycine max
Glyma.06G150800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12289070-12294069 Glycine max
Glyma.06G150800 10.0kb upstream 10.0kb upstream 15028 true Chr06: 12294070-12309097 Glycine max
Glyma.06G150800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12299098-12309097 Glycine max
Glyma.06G150800 10.0kb downstream 10.0kb downstream 15028 true Chr06: 12284070-12299097 Glycine max
Glyma.06G150800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12284070-12294069 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308250 5265 Fabidae View MSA
124061375 5270 Rosid View MSA
123739747 5271 Pentapetalae View MSA
122789164 5272 Eudicot View MSA
122042380 5273 Angiosperm View MSA
121345600 5274 Embryophyte View MSA
123380242 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01647 0.0 3.66916   Low
cufflinks 1.62402 0.0 5.65986    
cufflinks 2.5898 0.0 8.54226   High
cufflinks 2.11696 0.0 7.18171    
cufflinks 1.72521 0.0 5.97379    
cufflinks 1.79053 0.0 6.17928    
cufflinks 1.2689 0.0 4.51   Low
cufflinks 2.92405 0.0 9.50952   High
cufflinks 2.18767 0.0 7.38108    
cufflinks 1.043       Low
cufflinks 1.675        
cufflinks 1.723        
cufflinks 1.497        
cufflinks 1.891        
cufflinks 3.028       High
cufflinks 1.502        
cufflinks 1.001       Low
cufflinks 1.633        
cufflinks 1.67        
cufflinks 1.238        
cufflinks 1.639        
cufflinks 1.561        
cufflinks 1.157       Low
cufflinks 1.69        
cufflinks 1.353        
cufflinks 2.117       High

0 Strain