Gene : Glyma.06G153400 G. max Wm82.a2.v1
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  1534
Name:  ? Glyma.06G153400 Secondary Identifier:  ? PAC:30553228
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G153400 0.5kb upstream 0.5kb upstream 2451 true Chr06: 12527163-12529613 Glycine max
Glyma.06G153400 0.5kb upstream 0.5kb upstream 500 false Chr06: 12529114-12529613 Glycine max
Glyma.06G153400 0.5kb downstream 0.5kb downstream 2451 true Chr06: 12526663-12529113 Glycine max
Glyma.06G153400 0.5kb downstream 0.5kb downstream 500 false Chr06: 12526663-12527162 Glycine max
Glyma.06G153400 1.0kb upstream 1.0kb upstream 2951 true Chr06: 12527163-12530113 Glycine max
Glyma.06G153400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12529114-12530113 Glycine max
Glyma.06G153400 1.0kb downstream 1.0kb downstream 2951 true Chr06: 12526163-12529113 Glycine max
Glyma.06G153400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12526163-12527162 Glycine max
Glyma.06G153400 2.0kb upstream 2.0kb upstream 3951 true Chr06: 12527163-12531113 Glycine max
Glyma.06G153400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12529114-12531113 Glycine max
Glyma.06G153400 2.0kb downstream 2.0kb downstream 3951 true Chr06: 12525163-12529113 Glycine max
Glyma.06G153400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12525163-12527162 Glycine max
Glyma.06G153400 5.0kb upstream 5.0kb upstream 6951 true Chr06: 12527163-12534113 Glycine max
Glyma.06G153400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12529114-12534113 Glycine max
Glyma.06G153400 5.0kb downstream 5.0kb downstream 6951 true Chr06: 12522163-12529113 Glycine max
Glyma.06G153400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12522163-12527162 Glycine max
Glyma.06G153400 10.0kb upstream 10.0kb upstream 11951 true Chr06: 12527163-12539113 Glycine max
Glyma.06G153400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12529114-12539113 Glycine max
Glyma.06G153400 10.0kb downstream 10.0kb downstream 11951 true Chr06: 12517163-12529113 Glycine max
Glyma.06G153400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12517163-12527162 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303766 5265 Fabidae View MSA
124061930 5270 Rosid View MSA
123740594 5271 Pentapetalae View MSA
122785739 5272 Eudicot View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.0232 0.0 104.36 High High
cufflinks 13.3353 0.0 41.7066    
cufflinks 4.25487 0.0 15.3074    
cufflinks 5.16222 0.0 19.5453    
cufflinks 3.50383 0.0 14.012    
cufflinks 2.03759 0.0 9.73299    
cufflinks 4.10719 0.0 15.5583    
cufflinks 4.09891 0.0 15.9511    
cufflinks 0.589794 0.0 4.31715   Low
cufflinks 1.99        
cufflinks 0.16        
cufflinks 2.005        
cufflinks 0.166        
cufflinks 0.171        
cufflinks 0.086       Low
cufflinks 16.365     High High
cufflinks 0.304        
cufflinks 1.908        
cufflinks 2.798        
cufflinks 13.382     High High
cufflinks 0.126       Low
cufflinks 14.301     High High
cufflinks 11.431     High High
cufflinks 0.219        
cufflinks 17.188     High High
cufflinks 0.108       Low

0 Strain