Gene : Glyma.06G187600 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR12374:SF26 - F25A4.19 PROTEIN Genomic Order:  1876
Name:  ? Glyma.06G187600 Secondary Identifier:  ? PAC:30550623
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G187600 0.5kb upstream 0.5kb upstream 3382 true Chr06: 16378594-16381975 Glycine max
Glyma.06G187600 0.5kb upstream 0.5kb upstream 500 false Chr06: 16378594-16379093 Glycine max
Glyma.06G187600 0.5kb downstream 0.5kb downstream 3382 true Chr06: 16379094-16382475 Glycine max
Glyma.06G187600 0.5kb downstream 0.5kb downstream 500 false Chr06: 16381976-16382475 Glycine max
Glyma.06G187600 1.0kb upstream 1.0kb upstream 3882 true Chr06: 16378094-16381975 Glycine max
Glyma.06G187600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16378094-16379093 Glycine max
Glyma.06G187600 1.0kb downstream 1.0kb downstream 3882 true Chr06: 16379094-16382975 Glycine max
Glyma.06G187600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16381976-16382975 Glycine max
Glyma.06G187600 2.0kb upstream 2.0kb upstream 4882 true Chr06: 16377094-16381975 Glycine max
Glyma.06G187600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16377094-16379093 Glycine max
Glyma.06G187600 2.0kb downstream 2.0kb downstream 4882 true Chr06: 16379094-16383975 Glycine max
Glyma.06G187600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16381976-16383975 Glycine max
Glyma.06G187600 5.0kb upstream 5.0kb upstream 7882 true Chr06: 16374094-16381975 Glycine max
Glyma.06G187600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16374094-16379093 Glycine max
Glyma.06G187600 5.0kb downstream 5.0kb downstream 7882 true Chr06: 16379094-16386975 Glycine max
Glyma.06G187600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16381976-16386975 Glycine max
Glyma.06G187600 10.0kb upstream 10.0kb upstream 12882 true Chr06: 16369094-16381975 Glycine max
Glyma.06G187600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16369094-16379093 Glycine max
Glyma.06G187600 10.0kb downstream 10.0kb downstream 12882 true Chr06: 16379094-16391975 Glycine max
Glyma.06G187600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16381976-16391975 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310492 5265 Fabidae View MSA
124069217 5270 Rosid View MSA
123738697 5271 Pentapetalae View MSA
122794974 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.0136 0.0 66.7576 High  
cufflinks 13.1257 0.0 35.6009    
cufflinks 17.4077 0.0 46.6465    
cufflinks 19.3909 0.0 51.8107    
cufflinks 52.9782 0.0 147.031 High High
cufflinks 12.4689 0.0 33.9113   Low
cufflinks 13.3869 0.0 36.253    
cufflinks 39.826 0.0 108.084 High  
cufflinks 49.2051 0.0 135.518 High High
cufflinks 14.183     High  
cufflinks 3.742       Low
cufflinks 13.201     High  
cufflinks 16.637     High High
cufflinks 18.004     High High
cufflinks 46.915     High High
cufflinks 3.92        
cufflinks 5.099        
cufflinks 9.643     High  
cufflinks 5.347        
cufflinks 4.34        
cufflinks 7.9     High  
cufflinks 4.047        
cufflinks 3.521       Low
cufflinks 7.042     High  
cufflinks 5.475        
cufflinks 9.185     High  

0 Strain