Gene : Glyma.06G188600 G. max Wm82.a2.v1
Defline:  (1 of 18) PF02791 - DDT domain (DDT) Genomic Order:  1886
Name:  ? Glyma.06G188600 Secondary Identifier:  ? PAC:30550597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G188600 0.5kb upstream 0.5kb upstream 10159 true Chr06: 16450488-16460646 Glycine max
Glyma.06G188600 0.5kb upstream 0.5kb upstream 500 false Chr06: 16460147-16460646 Glycine max
Glyma.06G188600 0.5kb downstream 0.5kb downstream 10159 true Chr06: 16449988-16460146 Glycine max
Glyma.06G188600 0.5kb downstream 0.5kb downstream 500 false Chr06: 16449988-16450487 Glycine max
Glyma.06G188600 1.0kb upstream 1.0kb upstream 10659 true Chr06: 16450488-16461146 Glycine max
Glyma.06G188600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16460147-16461146 Glycine max
Glyma.06G188600 1.0kb downstream 1.0kb downstream 10659 true Chr06: 16449488-16460146 Glycine max
Glyma.06G188600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16449488-16450487 Glycine max
Glyma.06G188600 2.0kb upstream 2.0kb upstream 11659 true Chr06: 16450488-16462146 Glycine max
Glyma.06G188600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16460147-16462146 Glycine max
Glyma.06G188600 2.0kb downstream 2.0kb downstream 11659 true Chr06: 16448488-16460146 Glycine max
Glyma.06G188600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16448488-16450487 Glycine max
Glyma.06G188600 5.0kb upstream 5.0kb upstream 14659 true Chr06: 16450488-16465146 Glycine max
Glyma.06G188600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16460147-16465146 Glycine max
Glyma.06G188600 5.0kb downstream 5.0kb downstream 14659 true Chr06: 16445488-16460146 Glycine max
Glyma.06G188600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16445488-16450487 Glycine max
Glyma.06G188600 10.0kb upstream 10.0kb upstream 19659 true Chr06: 16450488-16470146 Glycine max
Glyma.06G188600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16460147-16470146 Glycine max
Glyma.06G188600 10.0kb downstream 10.0kb downstream 19659 true Chr06: 16440488-16460146 Glycine max
Glyma.06G188600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16440488-16450487 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309228 5265 Fabidae View MSA
124063029 5270 Rosid View MSA
123740242 5271 Pentapetalae View MSA
122790734 5272 Eudicot View MSA
122047444 5273 Angiosperm View MSA
121350354 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.70118 0.0 7.75608    
cufflinks 3.95006 0.0 10.9173    
cufflinks 2.59235 0.0 7.48988    
cufflinks 4.26715 0.0 11.7123   High
cufflinks 2.85936 0.0 8.14941    
cufflinks 2.06235 0.0 6.12957   Low
cufflinks 4.48813 0.0 12.2839   High
cufflinks 3.36182 0.0 9.41665    
cufflinks 2.98592 0.0 8.47518    
cufflinks 0.843        
cufflinks 0.745       Low
cufflinks 1.491       High
cufflinks 1.044        
cufflinks 1.167        
cufflinks 0.897        
cufflinks 1.052        
cufflinks 0.598       Low
cufflinks 1.956       High
cufflinks 1.781       High
cufflinks 0.931        
cufflinks 0.936        
cufflinks 1.064        
cufflinks 1.229        
cufflinks 0.912        
cufflinks 0.784        
cufflinks 1.061        

0 Strain