Gene : Glyma.06G189200 G. max Wm82.a2.v1
Defline:  (1 of 4) K10886 - DNA-repair protein XRCC4 Genomic Order:  1892
Name:  ? Glyma.06G189200 Secondary Identifier:  ? PAC:30549231
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G189200 0.5kb upstream 0.5kb upstream 2991 true Chr06: 16516328-16519318 Glycine max
Glyma.06G189200 0.5kb upstream 0.5kb upstream 500 false Chr06: 16516328-16516827 Glycine max
Glyma.06G189200 0.5kb downstream 0.5kb downstream 2991 true Chr06: 16516828-16519818 Glycine max
Glyma.06G189200 0.5kb downstream 0.5kb downstream 500 false Chr06: 16519319-16519818 Glycine max
Glyma.06G189200 1.0kb upstream 1.0kb upstream 3491 true Chr06: 16515828-16519318 Glycine max
Glyma.06G189200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16515828-16516827 Glycine max
Glyma.06G189200 1.0kb downstream 1.0kb downstream 3491 true Chr06: 16516828-16520318 Glycine max
Glyma.06G189200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16519319-16520318 Glycine max
Glyma.06G189200 2.0kb upstream 2.0kb upstream 4491 true Chr06: 16514828-16519318 Glycine max
Glyma.06G189200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16514828-16516827 Glycine max
Glyma.06G189200 2.0kb downstream 2.0kb downstream 4491 true Chr06: 16516828-16521318 Glycine max
Glyma.06G189200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16519319-16521318 Glycine max
Glyma.06G189200 5.0kb upstream 5.0kb upstream 7491 true Chr06: 16511828-16519318 Glycine max
Glyma.06G189200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16511828-16516827 Glycine max
Glyma.06G189200 5.0kb downstream 5.0kb downstream 7491 true Chr06: 16516828-16524318 Glycine max
Glyma.06G189200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16519319-16524318 Glycine max
Glyma.06G189200 10.0kb upstream 10.0kb upstream 12491 true Chr06: 16506828-16519318 Glycine max
Glyma.06G189200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16506828-16516827 Glycine max
Glyma.06G189200 10.0kb downstream 10.0kb downstream 12491 true Chr06: 16516828-16529318 Glycine max
Glyma.06G189200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16519319-16529318 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657132 5273 Angiosperm View MSA
122250277 5265 Fabidae View MSA
124038392 5270 Rosid View MSA
123610784 5271 Pentapetalae View MSA
122645376 5272 Eudicot View MSA
120929179 5274 Embryophyte View MSA
122969751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.018     Low  
cufflinks 0.019     Low  
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.03     Low  
cufflinks 0.015     Low  
cufflinks 0.018     Low  
cufflinks 0.017     Low  
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.119       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain