Gene : Glyma.06G194200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33415:SF3 - EMB514 Genomic Order:  1942
Name:  ? Glyma.06G194200 Secondary Identifier:  ? PAC:30553249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G194200 0.5kb upstream 0.5kb upstream 2203 true Chr06: 17312512-17314714 Glycine max
Glyma.06G194200 0.5kb upstream 0.5kb upstream 500 false Chr06: 17312512-17313011 Glycine max
Glyma.06G194200 0.5kb downstream 0.5kb downstream 2203 true Chr06: 17313012-17315214 Glycine max
Glyma.06G194200 0.5kb downstream 0.5kb downstream 500 false Chr06: 17314715-17315214 Glycine max
Glyma.06G194200 1.0kb upstream 1.0kb upstream 2703 true Chr06: 17312012-17314714 Glycine max
Glyma.06G194200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17312012-17313011 Glycine max
Glyma.06G194200 1.0kb downstream 1.0kb downstream 2703 true Chr06: 17313012-17315714 Glycine max
Glyma.06G194200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17314715-17315714 Glycine max
Glyma.06G194200 2.0kb upstream 2.0kb upstream 3703 true Chr06: 17311012-17314714 Glycine max
Glyma.06G194200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17311012-17313011 Glycine max
Glyma.06G194200 2.0kb downstream 2.0kb downstream 3703 true Chr06: 17313012-17316714 Glycine max
Glyma.06G194200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17314715-17316714 Glycine max
Glyma.06G194200 5.0kb upstream 5.0kb upstream 6703 true Chr06: 17308012-17314714 Glycine max
Glyma.06G194200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17308012-17313011 Glycine max
Glyma.06G194200 5.0kb downstream 5.0kb downstream 6703 true Chr06: 17313012-17319714 Glycine max
Glyma.06G194200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17314715-17319714 Glycine max
Glyma.06G194200 10.0kb upstream 10.0kb upstream 11703 true Chr06: 17303012-17314714 Glycine max
Glyma.06G194200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17303012-17313011 Glycine max
Glyma.06G194200 10.0kb downstream 10.0kb downstream 11703 true Chr06: 17313012-17324714 Glycine max
Glyma.06G194200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17314715-17324714 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300763 5265 Fabidae View MSA
124063233 5270 Rosid View MSA
123742093 5271 Pentapetalae View MSA
122792599 5272 Eudicot View MSA
122051410 5273 Angiosperm View MSA
121348604 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.89774 0.0 27.7346    
cufflinks 7.17406 0.0 20.9795    
cufflinks 4.28289 0.0 13.4528   Low
cufflinks 6.73405 0.0 19.75    
cufflinks 12.916 0.0 35.255   High
cufflinks 7.11774 0.0 20.7754    
cufflinks 12.3598 0.0 33.8936   High
cufflinks 8.62628 0.0 24.5477    
cufflinks 9.14592 0.0 25.8874    
cufflinks 3.73        
cufflinks 1.61       Low
cufflinks 4.601        
cufflinks 9.529     High High
cufflinks 14.419     High High
cufflinks 2.217        
cufflinks 3.259        
cufflinks 3.435        
cufflinks 3.469        
cufflinks 5.75        
cufflinks 2.763        
cufflinks 2.096        
cufflinks 2.629        
cufflinks 3.981        
cufflinks 1.68       Low
cufflinks 2.818        
cufflinks 2.943        

0 Strain