Gene : Glyma.06G179900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14281:SF0 - KINETOCHORE PROTEIN SPC25 Genomic Order:  1799
Name:  ? Glyma.06G179900 Secondary Identifier:  ? PAC:30551362
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G179900 0.5kb upstream 0.5kb upstream 4930 true Chr06: 15264257-15269186 Glycine max
Glyma.06G179900 0.5kb upstream 0.5kb upstream 500 false Chr06: 15268687-15269186 Glycine max
Glyma.06G179900 0.5kb downstream 0.5kb downstream 4930 true Chr06: 15263757-15268686 Glycine max
Glyma.06G179900 0.5kb downstream 0.5kb downstream 500 false Chr06: 15263757-15264256 Glycine max
Glyma.06G179900 1.0kb upstream 1.0kb upstream 5430 true Chr06: 15264257-15269686 Glycine max
Glyma.06G179900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15268687-15269686 Glycine max
Glyma.06G179900 1.0kb downstream 1.0kb downstream 5430 true Chr06: 15263257-15268686 Glycine max
Glyma.06G179900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15263257-15264256 Glycine max
Glyma.06G179900 2.0kb upstream 2.0kb upstream 6430 true Chr06: 15264257-15270686 Glycine max
Glyma.06G179900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15268687-15270686 Glycine max
Glyma.06G179900 2.0kb downstream 2.0kb downstream 6430 true Chr06: 15262257-15268686 Glycine max
Glyma.06G179900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15262257-15264256 Glycine max
Glyma.06G179900 5.0kb upstream 5.0kb upstream 9430 true Chr06: 15264257-15273686 Glycine max
Glyma.06G179900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15268687-15273686 Glycine max
Glyma.06G179900 5.0kb downstream 5.0kb downstream 9430 true Chr06: 15259257-15268686 Glycine max
Glyma.06G179900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15259257-15264256 Glycine max
Glyma.06G179900 10.0kb upstream 10.0kb upstream 14430 true Chr06: 15264257-15278686 Glycine max
Glyma.06G179900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15268687-15278686 Glycine max
Glyma.06G179900 10.0kb downstream 10.0kb downstream 14430 true Chr06: 15254257-15268686 Glycine max
Glyma.06G179900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15254257-15264256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253752 5265 Fabidae View MSA
124060731 5270 Rosid View MSA
123740734 5271 Pentapetalae View MSA
122790500 5272 Eudicot View MSA
122047601 5273 Angiosperm View MSA
121348266 5274 Embryophyte View MSA
123424992 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0338973 0.0 0.153301 Low Low
cufflinks 0.948342 0.0 3.56742   High
cufflinks 0.124273 0.0 0.507566 Low  
cufflinks 0.232884 0.0 0.926628    
cufflinks 0.596713 0.0 2.29036    
cufflinks 0.378778 0.0 1.48252    
cufflinks 0.532657 0.0 2.0557    
cufflinks 0.420699 0.0 1.63749    
cufflinks 0.401849 0.0 1.56862    
cufflinks 0.217        
cufflinks 0.017     Low Low
cufflinks 0.145        
cufflinks 0.258        
cufflinks 0.319        
cufflinks 0.038     Low Low
cufflinks 0.476        
cufflinks 0.052     Low  
cufflinks 0.239        
cufflinks 0.687       High
cufflinks 0.346        
cufflinks 0.019     Low Low
cufflinks 0.379        
cufflinks 0.457        
cufflinks 0.031     Low Low
cufflinks 0.299        
cufflinks 0.085        

0 Strain