Gene : Glyma.06G184600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15141:SF52 - BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Genomic Order:  1846
Name:  ? Glyma.06G184600 Secondary Identifier:  ? PAC:30551753
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G184600 0.5kb upstream 0.5kb upstream 9860 true Chr06: 15981974-15991833 Glycine max
Glyma.06G184600 0.5kb upstream 0.5kb upstream 500 false Chr06: 15991334-15991833 Glycine max
Glyma.06G184600 0.5kb downstream 0.5kb downstream 9860 true Chr06: 15981474-15991333 Glycine max
Glyma.06G184600 0.5kb downstream 0.5kb downstream 500 false Chr06: 15981474-15981973 Glycine max
Glyma.06G184600 1.0kb upstream 1.0kb upstream 10360 true Chr06: 15981974-15992333 Glycine max
Glyma.06G184600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15991334-15992333 Glycine max
Glyma.06G184600 1.0kb downstream 1.0kb downstream 10360 true Chr06: 15980974-15991333 Glycine max
Glyma.06G184600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15980974-15981973 Glycine max
Glyma.06G184600 2.0kb upstream 2.0kb upstream 11360 true Chr06: 15981974-15993333 Glycine max
Glyma.06G184600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15991334-15993333 Glycine max
Glyma.06G184600 2.0kb downstream 2.0kb downstream 11360 true Chr06: 15979974-15991333 Glycine max
Glyma.06G184600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15979974-15981973 Glycine max
Glyma.06G184600 5.0kb upstream 5.0kb upstream 14360 true Chr06: 15981974-15996333 Glycine max
Glyma.06G184600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15991334-15996333 Glycine max
Glyma.06G184600 5.0kb downstream 5.0kb downstream 14360 true Chr06: 15976974-15991333 Glycine max
Glyma.06G184600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15976974-15981973 Glycine max
Glyma.06G184600 10.0kb upstream 10.0kb upstream 19360 true Chr06: 15981974-16001333 Glycine max
Glyma.06G184600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15991334-16001333 Glycine max
Glyma.06G184600 10.0kb downstream 10.0kb downstream 19360 true Chr06: 15971974-15991333 Glycine max
Glyma.06G184600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15971974-15981973 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308777 5265 Fabidae View MSA
124070029 5270 Rosid View MSA
123751253 5271 Pentapetalae View MSA
122792090 5272 Eudicot View MSA
122044388 5273 Angiosperm View MSA
121350650 5274 Embryophyte View MSA
123381837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3843 0.0 45.7862   High
cufflinks 7.95884 0.0 24.9467    
cufflinks 13.8042 0.0 47.3294   High
cufflinks 11.2286 0.0 37.1743    
cufflinks 6.47782 0.0 19.5871   Low
cufflinks 9.12124 0.0 28.8154    
cufflinks 11.4224 0.0 34.5302    
cufflinks 8.70588 0.0 27.277    
cufflinks 8.58603 0.0 26.8714    
cufflinks 8.229     High  
cufflinks 12.928     High High
cufflinks 10.825     High  
cufflinks 5.765       Low
cufflinks 4.455       Low
cufflinks 11.671     High High
cufflinks 7.508     High  
cufflinks 11.783     High High
cufflinks 8.919     High  
cufflinks 9.161     High  
cufflinks 7.804     High  
cufflinks 9.101     High  
cufflinks 8.563     High  
cufflinks 7.077        
cufflinks 10.364     High  
cufflinks 7.527     High  
cufflinks 9.746     High  

0 Strain