Gene : Glyma.06G175800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12231:SF150 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC Genomic Order:  1758
Name:  ? Glyma.06G175800 Secondary Identifier:  ? PAC:30549325
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G175800 0.5kb upstream 0.5kb upstream 4584 true Chr06: 14870321-14874904 Glycine max
Glyma.06G175800 0.5kb upstream 0.5kb upstream 500 false Chr06: 14870321-14870820 Glycine max
Glyma.06G175800 0.5kb downstream 0.5kb downstream 4584 true Chr06: 14870821-14875404 Glycine max
Glyma.06G175800 0.5kb downstream 0.5kb downstream 500 false Chr06: 14874905-14875404 Glycine max
Glyma.06G175800 1.0kb upstream 1.0kb upstream 5084 true Chr06: 14869821-14874904 Glycine max
Glyma.06G175800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14869821-14870820 Glycine max
Glyma.06G175800 1.0kb downstream 1.0kb downstream 5084 true Chr06: 14870821-14875904 Glycine max
Glyma.06G175800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14874905-14875904 Glycine max
Glyma.06G175800 2.0kb upstream 2.0kb upstream 6084 true Chr06: 14868821-14874904 Glycine max
Glyma.06G175800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14868821-14870820 Glycine max
Glyma.06G175800 2.0kb downstream 2.0kb downstream 6084 true Chr06: 14870821-14876904 Glycine max
Glyma.06G175800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14874905-14876904 Glycine max
Glyma.06G175800 5.0kb upstream 5.0kb upstream 9084 true Chr06: 14865821-14874904 Glycine max
Glyma.06G175800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14865821-14870820 Glycine max
Glyma.06G175800 5.0kb downstream 5.0kb downstream 9084 true Chr06: 14870821-14879904 Glycine max
Glyma.06G175800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14874905-14879904 Glycine max
Glyma.06G175800 10.0kb upstream 10.0kb upstream 14084 true Chr06: 14860821-14874904 Glycine max
Glyma.06G175800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14860821-14870820 Glycine max
Glyma.06G175800 10.0kb downstream 10.0kb downstream 14084 true Chr06: 14870821-14884904 Glycine max
Glyma.06G175800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14874905-14884904 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309643 5265 Fabidae View MSA
124062232 5270 Rosid View MSA
123739667 5271 Pentapetalae View MSA
122790704 5272 Eudicot View MSA
122048365 5273 Angiosperm View MSA
121346213 5274 Embryophyte View MSA
123428656 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8282 0.0 60.9663 High High
cufflinks 18.5387 0.0 49.4678   High
cufflinks 9.92297 0.0 27.0567    
cufflinks 9.29251 0.0 25.4841    
cufflinks 10.2946 0.0 28.0693    
cufflinks 7.46162 0.0 20.8709   Low
cufflinks 13.85 0.0 37.1955    
cufflinks 8.83804 0.0 24.3275    
cufflinks 7.4072 0.0 20.7172   Low
cufflinks 6.278        
cufflinks 1.401       Low
cufflinks 4.602        
cufflinks 2.945        
cufflinks 2.511        
cufflinks 1.727       Low
cufflinks 17.278     High High
cufflinks 3.064        
cufflinks 5.367        
cufflinks 8.491     High  
cufflinks 17.398     High High
cufflinks 1.99       Low
cufflinks 16.662     High High
cufflinks 18.267     High High
cufflinks 2.281        
cufflinks 17.521     High High
cufflinks 4.923        

0 Strain