Gene : Glyma.06G178600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641//PTHR10641:SF466 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  1786
Name:  ? Glyma.06G178600 Secondary Identifier:  ? PAC:30549181
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G178600 0.5kb upstream 0.5kb upstream 2506 true Chr06: 15131365-15133870 Glycine max
Glyma.06G178600 0.5kb upstream 0.5kb upstream 500 false Chr06: 15133371-15133870 Glycine max
Glyma.06G178600 0.5kb downstream 0.5kb downstream 2506 true Chr06: 15130865-15133370 Glycine max
Glyma.06G178600 0.5kb downstream 0.5kb downstream 500 false Chr06: 15130865-15131364 Glycine max
Glyma.06G178600 1.0kb upstream 1.0kb upstream 3006 true Chr06: 15131365-15134370 Glycine max
Glyma.06G178600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15133371-15134370 Glycine max
Glyma.06G178600 1.0kb downstream 1.0kb downstream 3006 true Chr06: 15130365-15133370 Glycine max
Glyma.06G178600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15130365-15131364 Glycine max
Glyma.06G178600 2.0kb upstream 2.0kb upstream 4006 true Chr06: 15131365-15135370 Glycine max
Glyma.06G178600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15133371-15135370 Glycine max
Glyma.06G178600 2.0kb downstream 2.0kb downstream 4006 true Chr06: 15129365-15133370 Glycine max
Glyma.06G178600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15129365-15131364 Glycine max
Glyma.06G178600 5.0kb upstream 5.0kb upstream 7006 true Chr06: 15131365-15138370 Glycine max
Glyma.06G178600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15133371-15138370 Glycine max
Glyma.06G178600 5.0kb downstream 5.0kb downstream 7006 true Chr06: 15126365-15133370 Glycine max
Glyma.06G178600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15126365-15131364 Glycine max
Glyma.06G178600 10.0kb upstream 10.0kb upstream 12006 true Chr06: 15131365-15143370 Glycine max
Glyma.06G178600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15133371-15143370 Glycine max
Glyma.06G178600 10.0kb downstream 10.0kb downstream 12006 true Chr06: 15121365-15133370 Glycine max
Glyma.06G178600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15121365-15131364 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255018 5265 Fabidae View MSA
123996920 5270 Rosid View MSA
123745100 5271 Pentapetalae View MSA
122796774 5272 Eudicot View MSA
122046378 5273 Angiosperm View MSA
121349090 5274 Embryophyte View MSA
123381162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.81513 0.0 2.93306    
cufflinks 1.68765 0.0 5.68817    
cufflinks 0.319696 0.0 1.20698   Low
cufflinks 0.317046 0.0 1.1978   Low
cufflinks 1.24357 0.0 4.33555    
cufflinks 0.401607 0.0 1.50262    
cufflinks 0.813088 0.0 2.92874    
cufflinks 4.07086 0.0 12.1377   High
cufflinks 0.41624 0.0 1.55441    
cufflinks 18.53     High High
cufflinks 0.545        
cufflinks 0.947        
cufflinks 1.567        
cufflinks 0.394        
cufflinks 0.048     Low Low
cufflinks 1.394        
cufflinks 7.825     High High
cufflinks 0.532        
cufflinks 0.61        
cufflinks 0.515        
cufflinks 0.255        
cufflinks 1.131        
cufflinks 1.6        
cufflinks 0.163       Low
cufflinks 0.547        
cufflinks 0.998        

0 Strain