Gene : Glyma.06G168600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31251:SF20 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A-RELATED Genomic Order:  1686
Name:  ? Glyma.06G168600 Secondary Identifier:  ? PAC:30549383
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G168600 0.5kb upstream 0.5kb upstream 5628 true Chr06: 14096898-14102525 Glycine max
Glyma.06G168600 0.5kb upstream 0.5kb upstream 500 false Chr06: 14096898-14097397 Glycine max
Glyma.06G168600 0.5kb downstream 0.5kb downstream 5628 true Chr06: 14097398-14103025 Glycine max
Glyma.06G168600 0.5kb downstream 0.5kb downstream 500 false Chr06: 14102526-14103025 Glycine max
Glyma.06G168600 1.0kb upstream 1.0kb upstream 6128 true Chr06: 14096398-14102525 Glycine max
Glyma.06G168600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14096398-14097397 Glycine max
Glyma.06G168600 1.0kb downstream 1.0kb downstream 6128 true Chr06: 14097398-14103525 Glycine max
Glyma.06G168600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14102526-14103525 Glycine max
Glyma.06G168600 2.0kb upstream 2.0kb upstream 7128 true Chr06: 14095398-14102525 Glycine max
Glyma.06G168600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14095398-14097397 Glycine max
Glyma.06G168600 2.0kb downstream 2.0kb downstream 7128 true Chr06: 14097398-14104525 Glycine max
Glyma.06G168600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14102526-14104525 Glycine max
Glyma.06G168600 5.0kb upstream 5.0kb upstream 10128 true Chr06: 14092398-14102525 Glycine max
Glyma.06G168600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14092398-14097397 Glycine max
Glyma.06G168600 5.0kb downstream 5.0kb downstream 10128 true Chr06: 14097398-14107525 Glycine max
Glyma.06G168600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14102526-14107525 Glycine max
Glyma.06G168600 10.0kb upstream 10.0kb upstream 15128 true Chr06: 14087398-14102525 Glycine max
Glyma.06G168600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14087398-14097397 Glycine max
Glyma.06G168600 10.0kb downstream 10.0kb downstream 15128 true Chr06: 14097398-14112525 Glycine max
Glyma.06G168600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14102526-14112525 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311176 5265 Fabidae View MSA
124071884 5270 Rosid View MSA
123752325 5271 Pentapetalae View MSA
122795767 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.879937 0.0 5.00815    
cufflinks 12.6704 0.0 49.7582   High
cufflinks 4.32637 0.0 22.0569    
cufflinks 5.51245 0.0 24.4667    
cufflinks 0.477405 0.0 3.63196    
cufflinks 0.412157 0.0 3.17658    
cufflinks 2.33795 0.0 12.2697    
cufflinks 2.58208 0.0 12.9349    
cufflinks 0.103716 0.0 0.410609 Low Low
cufflinks 1.329       High
cufflinks 0.007     Low  
cufflinks 0.576        
cufflinks 0.017     Low  
cufflinks 0.005     Low Low
cufflinks 0.002     Low Low
cufflinks 0.49        
cufflinks 0.027     Low  
cufflinks 0.636        
cufflinks 1.856       High
cufflinks 0.368        
cufflinks 0.007     Low  
cufflinks 0.351        
cufflinks 0.512        
cufflinks 0.004     Low Low
cufflinks 0.409        
cufflinks 0.004     Low Low

0 Strain