Gene : Glyma.06G169100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31956:SF2 - NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  1691
Name:  ? Glyma.06G169100 Secondary Identifier:  ? PAC:30550250
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G169100 0.5kb upstream 0.5kb upstream 3742 true Chr06: 14124041-14127782 Glycine max
Glyma.06G169100 0.5kb upstream 0.5kb upstream 500 false Chr06: 14124041-14124540 Glycine max
Glyma.06G169100 0.5kb downstream 0.5kb downstream 3742 true Chr06: 14124541-14128282 Glycine max
Glyma.06G169100 0.5kb downstream 0.5kb downstream 500 false Chr06: 14127783-14128282 Glycine max
Glyma.06G169100 1.0kb upstream 1.0kb upstream 4242 true Chr06: 14123541-14127782 Glycine max
Glyma.06G169100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14123541-14124540 Glycine max
Glyma.06G169100 1.0kb downstream 1.0kb downstream 4242 true Chr06: 14124541-14128782 Glycine max
Glyma.06G169100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14127783-14128782 Glycine max
Glyma.06G169100 2.0kb upstream 2.0kb upstream 5242 true Chr06: 14122541-14127782 Glycine max
Glyma.06G169100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14122541-14124540 Glycine max
Glyma.06G169100 2.0kb downstream 2.0kb downstream 5242 true Chr06: 14124541-14129782 Glycine max
Glyma.06G169100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14127783-14129782 Glycine max
Glyma.06G169100 5.0kb upstream 5.0kb upstream 8242 true Chr06: 14119541-14127782 Glycine max
Glyma.06G169100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14119541-14124540 Glycine max
Glyma.06G169100 5.0kb downstream 5.0kb downstream 8242 true Chr06: 14124541-14132782 Glycine max
Glyma.06G169100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14127783-14132782 Glycine max
Glyma.06G169100 10.0kb upstream 10.0kb upstream 13242 true Chr06: 14114541-14127782 Glycine max
Glyma.06G169100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14114541-14124540 Glycine max
Glyma.06G169100 10.0kb downstream 10.0kb downstream 13242 true Chr06: 14124541-14137782 Glycine max
Glyma.06G169100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14127783-14137782 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307803 5265 Fabidae View MSA
124067209 5270 Rosid View MSA
123741370 5271 Pentapetalae View MSA
122788110 5272 Eudicot View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.86887 0.0 6.38714    
cufflinks 6.28612 0.0 25.4011    
cufflinks 0.38707 0.0 1.84347   Low
cufflinks 5.27503 0.0 22.6987    
cufflinks 4.55105 0.0 15.4927    
cufflinks 1.3986 0.0 7.29828    
cufflinks 8.22493 0.0 25.2602    
cufflinks 9.83128 0.0 29.5377   High
cufflinks 4.57266 0.0 15.5122    
cufflinks 3.8       High
cufflinks 0.132       Low
cufflinks 0.664        
cufflinks 1.813        
cufflinks 1.367        
cufflinks 0.072       Low
cufflinks 1.735        
cufflinks 0.301        
cufflinks 1.928        
cufflinks 1.589        
cufflinks 1.339        
cufflinks 0.232       Low
cufflinks 1.897        
cufflinks 2.413        
cufflinks 0.191       Low
cufflinks 1.542        
cufflinks 0.268        

0 Strain