Gene : Glyma.06G170000 G. max Wm82.a2.v1
Defline:  (1 of 1) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  1700
Name:  ? Glyma.06G170000 Secondary Identifier:  ? PAC:30551778
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G170000 0.5kb upstream 0.5kb upstream 4374 true Chr06: 14193607-14197980 Glycine max
Glyma.06G170000 0.5kb upstream 0.5kb upstream 500 false Chr06: 14197481-14197980 Glycine max
Glyma.06G170000 0.5kb downstream 0.5kb downstream 4374 true Chr06: 14193107-14197480 Glycine max
Glyma.06G170000 0.5kb downstream 0.5kb downstream 500 false Chr06: 14193107-14193606 Glycine max
Glyma.06G170000 1.0kb upstream 1.0kb upstream 4874 true Chr06: 14193607-14198480 Glycine max
Glyma.06G170000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14197481-14198480 Glycine max
Glyma.06G170000 1.0kb downstream 1.0kb downstream 4874 true Chr06: 14192607-14197480 Glycine max
Glyma.06G170000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14192607-14193606 Glycine max
Glyma.06G170000 2.0kb upstream 2.0kb upstream 5874 true Chr06: 14193607-14199480 Glycine max
Glyma.06G170000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14197481-14199480 Glycine max
Glyma.06G170000 2.0kb downstream 2.0kb downstream 5874 true Chr06: 14191607-14197480 Glycine max
Glyma.06G170000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14191607-14193606 Glycine max
Glyma.06G170000 5.0kb upstream 5.0kb upstream 8874 true Chr06: 14193607-14202480 Glycine max
Glyma.06G170000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14197481-14202480 Glycine max
Glyma.06G170000 5.0kb downstream 5.0kb downstream 8874 true Chr06: 14188607-14197480 Glycine max
Glyma.06G170000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14188607-14193606 Glycine max
Glyma.06G170000 10.0kb upstream 10.0kb upstream 13874 true Chr06: 14193607-14207480 Glycine max
Glyma.06G170000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14197481-14207480 Glycine max
Glyma.06G170000 10.0kb downstream 10.0kb downstream 13874 true Chr06: 14183607-14197480 Glycine max
Glyma.06G170000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14183607-14193606 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310753 5265 Fabidae View MSA
124062307 5270 Rosid View MSA
123738908 5271 Pentapetalae View MSA
122785764 5272 Eudicot View MSA
122044332 5273 Angiosperm View MSA
121347668 5274 Embryophyte View MSA
123380595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79326 0.0 13.8209    
cufflinks 3.09017 0.0 9.46675   Low
cufflinks 7.49536 0.0 20.6174   High
cufflinks 3.17021 0.0 9.65554    
cufflinks 3.78485 0.0 11.2602    
cufflinks 4.92003 0.0 14.1459    
cufflinks 3.29741 0.0 10.0173    
cufflinks 4.3123 0.0 12.6168    
cufflinks 4.1008 0.0 12.0771    
cufflinks 1.648       Low
cufflinks 4.483        
cufflinks 5.575       High
cufflinks 2.819        
cufflinks 3.225        
cufflinks 6.631     High High
cufflinks 2.92        
cufflinks 1.617       Low
cufflinks 4.17        
cufflinks 3.899        
cufflinks 2.841        
cufflinks 5.13       High
cufflinks 3.263        
cufflinks 2.599        
cufflinks 5.199       High
cufflinks 3.025        
cufflinks 3.483        

0 Strain