Gene : Glyma.06G171600 G. max Wm82.a2.v1
Defline:  (1 of 6) 6.3.4.5 - Argininosuccinate synthase / Citrulline--aspartate ligase Genomic Order:  1716
Name:  ? Glyma.06G171600 Secondary Identifier:  ? PAC:30552959
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGSYNBSUB-PWY Glycine max pathologic  
Gmax ARGSYN-PWY Glycine max pathologic  
Gmax PWY-4984 Glycine max pathologic  
Gmax PWY-5 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G171600 0.5kb upstream 0.5kb upstream 1567 true Chr06: 14362492-14364058 Glycine max
Glyma.06G171600 0.5kb upstream 0.5kb upstream 500 false Chr06: 14362492-14362991 Glycine max
Glyma.06G171600 0.5kb downstream 0.5kb downstream 1567 true Chr06: 14362992-14364558 Glycine max
Glyma.06G171600 0.5kb downstream 0.5kb downstream 500 false Chr06: 14364059-14364558 Glycine max
Glyma.06G171600 1.0kb upstream 1.0kb upstream 2067 true Chr06: 14361992-14364058 Glycine max
Glyma.06G171600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14361992-14362991 Glycine max
Glyma.06G171600 1.0kb downstream 1.0kb downstream 2067 true Chr06: 14362992-14365058 Glycine max
Glyma.06G171600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14364059-14365058 Glycine max
Glyma.06G171600 2.0kb upstream 2.0kb upstream 3067 true Chr06: 14360992-14364058 Glycine max
Glyma.06G171600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14360992-14362991 Glycine max
Glyma.06G171600 2.0kb downstream 2.0kb downstream 3067 true Chr06: 14362992-14366058 Glycine max
Glyma.06G171600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14364059-14366058 Glycine max
Glyma.06G171600 5.0kb upstream 5.0kb upstream 6067 true Chr06: 14357992-14364058 Glycine max
Glyma.06G171600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14357992-14362991 Glycine max
Glyma.06G171600 5.0kb downstream 5.0kb downstream 6067 true Chr06: 14362992-14369058 Glycine max
Glyma.06G171600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14364059-14369058 Glycine max
Glyma.06G171600 10.0kb upstream 10.0kb upstream 11067 true Chr06: 14352992-14364058 Glycine max
Glyma.06G171600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14352992-14362991 Glycine max
Glyma.06G171600 10.0kb downstream 10.0kb downstream 11067 true Chr06: 14362992-14374058 Glycine max
Glyma.06G171600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14364059-14374058 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121610786 5273 Angiosperm Singleton cluster - no MSA
122243605 5265 Fabidae Singleton cluster - no MSA
123988091 5270 Rosid Singleton cluster - no MSA
123563306 5271 Pentapetalae Singleton cluster - no MSA
122598085 5272 Eudicot Singleton cluster - no MSA
120883025 5274 Embryophyte Singleton cluster - no MSA
122923852 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.167115 0.0 0.691714 Low  
cufflinks 0.106955 0.0 0.456841 Low  
cufflinks 0.0662993 0.0 0.293461 Low Low
cufflinks 0.117612 0.0 0.497942 Low  
cufflinks 2.89436 0.0 10.5449   High
cufflinks 5.47731 0.0 19.0615   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.324224 0.0 1.29838    
cufflinks 3.06664 0.0 11.1307   High
cufflinks 0.013     Low Low
cufflinks 0.737        
cufflinks 0.058     Low  
cufflinks 0.214        
cufflinks 0.274        
cufflinks 0.567        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.866        
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.726        
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.937        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.332       High

0 Strain