Gene : Glyma.06G172600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10836//PTHR10836:SF44 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  1726
Name:  ? Glyma.06G172600 Secondary Identifier:  ? PAC:30553716
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G172600 0.5kb upstream 0.5kb upstream 10254 true Chr06: 14466166-14476419 Glycine max
Glyma.06G172600 0.5kb upstream 0.5kb upstream 500 false Chr06: 14475920-14476419 Glycine max
Glyma.06G172600 0.5kb downstream 0.5kb downstream 10254 true Chr06: 14465666-14475919 Glycine max
Glyma.06G172600 0.5kb downstream 0.5kb downstream 500 false Chr06: 14465666-14466165 Glycine max
Glyma.06G172600 1.0kb upstream 1.0kb upstream 10754 true Chr06: 14466166-14476919 Glycine max
Glyma.06G172600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14475920-14476919 Glycine max
Glyma.06G172600 1.0kb downstream 1.0kb downstream 10754 true Chr06: 14465166-14475919 Glycine max
Glyma.06G172600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14465166-14466165 Glycine max
Glyma.06G172600 2.0kb upstream 2.0kb upstream 11754 true Chr06: 14466166-14477919 Glycine max
Glyma.06G172600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14475920-14477919 Glycine max
Glyma.06G172600 2.0kb downstream 2.0kb downstream 11754 true Chr06: 14464166-14475919 Glycine max
Glyma.06G172600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14464166-14466165 Glycine max
Glyma.06G172600 5.0kb upstream 5.0kb upstream 14754 true Chr06: 14466166-14480919 Glycine max
Glyma.06G172600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14475920-14480919 Glycine max
Glyma.06G172600 5.0kb downstream 5.0kb downstream 14754 true Chr06: 14461166-14475919 Glycine max
Glyma.06G172600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14461166-14466165 Glycine max
Glyma.06G172600 10.0kb upstream 10.0kb upstream 19754 true Chr06: 14466166-14485919 Glycine max
Glyma.06G172600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14475920-14485919 Glycine max
Glyma.06G172600 10.0kb downstream 10.0kb downstream 19754 true Chr06: 14456166-14475919 Glycine max
Glyma.06G172600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14456166-14466165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314378 5265 Fabidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 378.821 0.0 19537.5 High  
cufflinks 400.285 0.0 22863.9 High  
cufflinks 316.567 0.0 7356.37 High  
cufflinks 531.485 0.0 19748.4 High  
cufflinks 415.157 0.0 19249.2 High  
cufflinks 249.493 0.0 6466.22 High Low
cufflinks 787.104 0.0 32584.6 High High
cufflinks 440.947 0.0 16874.7 High  
cufflinks 302.724 0.0 8536.23 High  
cufflinks 32.349     High High
cufflinks 8.646     High Low
cufflinks 16.861     High  
cufflinks 29.139     High High
cufflinks 37.003     High High
cufflinks 17.203     High  
cufflinks 11.197     High  
cufflinks 10.238     High  
cufflinks 28.183     High High
cufflinks 24.653     High  
cufflinks 7.893     High Low
cufflinks 18.774     High  
cufflinks 10.272     High  
cufflinks 15.905     High  
cufflinks 8.492     High Low
cufflinks 9.825     High  
cufflinks 10.836     High  

0 Strain