Gene : Glyma.06G209400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24031:SF301 - ATP-DEPENDENT RNA HELICASE DDX18 Genomic Order:  2094
Name:  ? Glyma.06G209400 Secondary Identifier:  ? PAC:30550209
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G209400 0.5kb upstream 0.5kb upstream 7844 true Chr06: 20621869-20629712 Glycine max
Glyma.06G209400 0.5kb upstream 0.5kb upstream 500 false Chr06: 20621869-20622368 Glycine max
Glyma.06G209400 0.5kb downstream 0.5kb downstream 7844 true Chr06: 20622369-20630212 Glycine max
Glyma.06G209400 0.5kb downstream 0.5kb downstream 500 false Chr06: 20629713-20630212 Glycine max
Glyma.06G209400 1.0kb upstream 1.0kb upstream 8344 true Chr06: 20621369-20629712 Glycine max
Glyma.06G209400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20621369-20622368 Glycine max
Glyma.06G209400 1.0kb downstream 1.0kb downstream 8344 true Chr06: 20622369-20630712 Glycine max
Glyma.06G209400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20629713-20630712 Glycine max
Glyma.06G209400 2.0kb upstream 2.0kb upstream 9344 true Chr06: 20620369-20629712 Glycine max
Glyma.06G209400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20620369-20622368 Glycine max
Glyma.06G209400 2.0kb downstream 2.0kb downstream 9344 true Chr06: 20622369-20631712 Glycine max
Glyma.06G209400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20629713-20631712 Glycine max
Glyma.06G209400 5.0kb upstream 5.0kb upstream 12344 true Chr06: 20617369-20629712 Glycine max
Glyma.06G209400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20617369-20622368 Glycine max
Glyma.06G209400 5.0kb downstream 5.0kb downstream 12344 true Chr06: 20622369-20634712 Glycine max
Glyma.06G209400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20629713-20634712 Glycine max
Glyma.06G209400 10.0kb upstream 10.0kb upstream 17344 true Chr06: 20612369-20629712 Glycine max
Glyma.06G209400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20612369-20622368 Glycine max
Glyma.06G209400 10.0kb downstream 10.0kb downstream 17344 true Chr06: 20622369-20639712 Glycine max
Glyma.06G209400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20629713-20639712 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311556 5265 Fabidae View MSA
124062286 5270 Rosid View MSA
123738458 5271 Pentapetalae View MSA
122788129 5272 Eudicot View MSA
122047465 5273 Angiosperm View MSA
121344633 5274 Embryophyte View MSA
123424646 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.42113 0.0 25.3225   High
cufflinks 5.3323 0.0 14.907    
cufflinks 3.5221 0.0 10.3265   Low
cufflinks 7.30056 0.0 19.8755    
cufflinks 9.48568 0.0 25.4831   High
cufflinks 4.54029 0.0 12.8965    
cufflinks 5.82506 0.0 16.1358    
cufflinks 8.45357 0.0 22.8325    
cufflinks 5.03654 0.0 14.1513    
cufflinks 1.86        
cufflinks 0.365       Low
cufflinks 1.422        
cufflinks 3.384       High
cufflinks 4.985       High
cufflinks 0.591       Low
cufflinks 0.928        
cufflinks 1.751        
cufflinks 1.366        
cufflinks 1.964        
cufflinks 0.714        
cufflinks 0.835        
cufflinks 0.872        
cufflinks 1.705        
cufflinks 0.54       Low
cufflinks 0.674        
cufflinks 1.163        

0 Strain