Gene : Glyma.06G216400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21717//PTHR21717:SF22 - TELOMERIC REPEAT BINDING PROTEIN Genomic Order:  2164
Name:  ? Glyma.06G216400 Secondary Identifier:  ? PAC:30551943
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G216400 0.5kb upstream 0.5kb upstream 6942 true Chr06: 22549077-22556018 Glycine max
Glyma.06G216400 0.5kb upstream 0.5kb upstream 500 false Chr06: 22555519-22556018 Glycine max
Glyma.06G216400 0.5kb downstream 0.5kb downstream 6942 true Chr06: 22548577-22555518 Glycine max
Glyma.06G216400 0.5kb downstream 0.5kb downstream 500 false Chr06: 22548577-22549076 Glycine max
Glyma.06G216400 1.0kb upstream 1.0kb upstream 7442 true Chr06: 22549077-22556518 Glycine max
Glyma.06G216400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22555519-22556518 Glycine max
Glyma.06G216400 1.0kb downstream 1.0kb downstream 7442 true Chr06: 22548077-22555518 Glycine max
Glyma.06G216400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22548077-22549076 Glycine max
Glyma.06G216400 2.0kb upstream 2.0kb upstream 8442 true Chr06: 22549077-22557518 Glycine max
Glyma.06G216400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22555519-22557518 Glycine max
Glyma.06G216400 2.0kb downstream 2.0kb downstream 8442 true Chr06: 22547077-22555518 Glycine max
Glyma.06G216400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22547077-22549076 Glycine max
Glyma.06G216400 5.0kb upstream 5.0kb upstream 11442 true Chr06: 22549077-22560518 Glycine max
Glyma.06G216400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22555519-22560518 Glycine max
Glyma.06G216400 5.0kb downstream 5.0kb downstream 11442 true Chr06: 22544077-22555518 Glycine max
Glyma.06G216400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22544077-22549076 Glycine max
Glyma.06G216400 10.0kb upstream 10.0kb upstream 16442 true Chr06: 22549077-22565518 Glycine max
Glyma.06G216400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22555519-22565518 Glycine max
Glyma.06G216400 10.0kb downstream 10.0kb downstream 16442 true Chr06: 22539077-22555518 Glycine max
Glyma.06G216400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22539077-22549076 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314491 5265 Fabidae View MSA
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.50182 0.0 33.7162   High
cufflinks 6.78308 0.0 30.5173    
cufflinks 4.32159 0.0 20.4837    
cufflinks 5.87592 0.0 23.3432    
cufflinks 4.77281 0.0 26.407    
cufflinks 2.55829 0.0 14.8756   Low
cufflinks 6.4551 0.0 28.6556    
cufflinks 4.6234 0.0 22.1926    
cufflinks 5.05056 0.0 23.9668    
cufflinks 0.279        
cufflinks 0.178       Low
cufflinks 0.452        
cufflinks 0.33        
cufflinks 0.46        
cufflinks 0.267        
cufflinks 0.586        
cufflinks 0.241        
cufflinks 0.485        
cufflinks 0.667       High
cufflinks 0.649       High
cufflinks 0.217       Low
cufflinks 0.595        
cufflinks 0.573        
cufflinks 0.189       Low
cufflinks 0.603       High
cufflinks 0.232       Low

0 Strain