Gene : Glyma.06G217000 G. max Wm82.a2.v1

Defline:  (1 of 4) PF09320 - Domain of unknown function (DUF1977) (DUF1977) Genomic Order:  2170
Name:  ? Glyma.06G217000 Secondary Identifier:  ? PAC:30549304

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G217000 0.5kb upstream 0.5kb upstream 2985 true Chr06: 22812152-22815136 Glycine max
Glyma.06G217000 0.5kb upstream 0.5kb upstream 500 false Chr06: 22812152-22812651 Glycine max
Glyma.06G217000 0.5kb downstream 0.5kb downstream 2985 true Chr06: 22812652-22815636 Glycine max
Glyma.06G217000 0.5kb downstream 0.5kb downstream 500 false Chr06: 22815137-22815636 Glycine max
Glyma.06G217000 1.0kb upstream 1.0kb upstream 3485 true Chr06: 22811652-22815136 Glycine max
Glyma.06G217000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22811652-22812651 Glycine max
Glyma.06G217000 1.0kb downstream 1.0kb downstream 3485 true Chr06: 22812652-22816136 Glycine max
Glyma.06G217000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22815137-22816136 Glycine max
Glyma.06G217000 2.0kb upstream 2.0kb upstream 4485 true Chr06: 22810652-22815136 Glycine max
Glyma.06G217000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22810652-22812651 Glycine max
Glyma.06G217000 2.0kb downstream 2.0kb downstream 4485 true Chr06: 22812652-22817136 Glycine max
Glyma.06G217000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22815137-22817136 Glycine max
Glyma.06G217000 5.0kb upstream 5.0kb upstream 7485 true Chr06: 22807652-22815136 Glycine max
Glyma.06G217000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22807652-22812651 Glycine max
Glyma.06G217000 5.0kb downstream 5.0kb downstream 7485 true Chr06: 22812652-22820136 Glycine max
Glyma.06G217000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22815137-22820136 Glycine max
Glyma.06G217000 10.0kb upstream 10.0kb upstream 12485 true Chr06: 22802652-22815136 Glycine max
Glyma.06G217000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22802652-22812651 Glycine max
Glyma.06G217000 10.0kb downstream 10.0kb downstream 12485 true Chr06: 22812652-22825136 Glycine max
Glyma.06G217000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22815137-22825136 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307326 5265 Fabidae View MSA
124061227 5270 Rosid View MSA
123743637 5271 Pentapetalae View MSA
122792301 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0633 0.0 32.2787    
cufflinks 8.08781 0.0 22.0266   Low
cufflinks 13.9846 0.0 37.323    
cufflinks 12.3832 0.0 33.1138    
cufflinks 15.7322 0.0 41.975    
cufflinks 17.8848 0.0 47.7908   High
cufflinks 14.0957 0.0 37.6171    
cufflinks 14.6086 0.0 38.9797    
cufflinks 17.3476 0.0 46.3248    
cufflinks 11.237     High High
cufflinks 10.439     High  
cufflinks 9.086     High  
cufflinks 6.735        
cufflinks 6.953     High  
cufflinks 9.372     High  
cufflinks 6.842        
cufflinks 16.659     High High
cufflinks 8.029     High  
cufflinks 6.059       Low
cufflinks 7.036     High  
cufflinks 10.208     High  
cufflinks 6.999        
cufflinks 6.111       Low
cufflinks 10.989     High  
cufflinks 6.566        
cufflinks 10.208     High  

0 Strain