Gene : Glyma.06G206200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR33914:SF2 - 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN Genomic Order:  2062
Name:  ? Glyma.06G206200 Secondary Identifier:  ? PAC:30552811
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G206200 0.5kb upstream 0.5kb upstream 5357 true Chr06: 19757095-19762451 Glycine max
Glyma.06G206200 0.5kb upstream 0.5kb upstream 500 false Chr06: 19757095-19757594 Glycine max
Glyma.06G206200 0.5kb downstream 0.5kb downstream 5357 true Chr06: 19757595-19762951 Glycine max
Glyma.06G206200 0.5kb downstream 0.5kb downstream 500 false Chr06: 19762452-19762951 Glycine max
Glyma.06G206200 1.0kb upstream 1.0kb upstream 5857 true Chr06: 19756595-19762451 Glycine max
Glyma.06G206200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19756595-19757594 Glycine max
Glyma.06G206200 1.0kb downstream 1.0kb downstream 5857 true Chr06: 19757595-19763451 Glycine max
Glyma.06G206200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19762452-19763451 Glycine max
Glyma.06G206200 2.0kb upstream 2.0kb upstream 6857 true Chr06: 19755595-19762451 Glycine max
Glyma.06G206200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19755595-19757594 Glycine max
Glyma.06G206200 2.0kb downstream 2.0kb downstream 6857 true Chr06: 19757595-19764451 Glycine max
Glyma.06G206200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19762452-19764451 Glycine max
Glyma.06G206200 5.0kb upstream 5.0kb upstream 9857 true Chr06: 19752595-19762451 Glycine max
Glyma.06G206200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19752595-19757594 Glycine max
Glyma.06G206200 5.0kb downstream 5.0kb downstream 9857 true Chr06: 19757595-19767451 Glycine max
Glyma.06G206200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19762452-19767451 Glycine max
Glyma.06G206200 10.0kb upstream 10.0kb upstream 14857 true Chr06: 19747595-19762451 Glycine max
Glyma.06G206200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19747595-19757594 Glycine max
Glyma.06G206200 10.0kb downstream 10.0kb downstream 14857 true Chr06: 19757595-19772451 Glycine max
Glyma.06G206200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19762452-19772451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312999 5265 Fabidae View MSA
124072821 5270 Rosid View MSA
123747257 5271 Pentapetalae View MSA
122794578 5272 Eudicot View MSA
122043601 5273 Angiosperm View MSA
121349006 5274 Embryophyte View MSA
123381122 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.20099 0.0 6.59996    
cufflinks 2.33102 0.0 10.964    
cufflinks 1.34251 0.0 8.64983    
cufflinks 8.27868 0.0 34.4673   High
cufflinks 0.387331 0.0 2.57916    
cufflinks 0.555329 0.0 2.7009    
cufflinks 0.75765 0.0 5.41445    
cufflinks 0.745885 0.0 4.41972    
cufflinks 0.104 0.0 0.415718 Low Low
cufflinks 0.09     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.186        
cufflinks 0.024     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073     Low  
cufflinks 0.003     Low Low
cufflinks 0.246       High
cufflinks 0.301       High
cufflinks 0.068     Low  
cufflinks 0.002     Low Low
cufflinks 0.09     Low  
cufflinks 0.059     Low  
cufflinks 0.002     Low Low
cufflinks 0.083     Low  
cufflinks 0.007     Low  

0 Strain