Gene : Glyma.06G195300 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG3292 - Predicted membrane protein Genomic Order:  1953
Name:  ? Glyma.06G195300 Secondary Identifier:  ? PAC:30554266
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G195300 0.5kb upstream 0.5kb upstream 2936 true Chr06: 17476287-17479222 Glycine max
Glyma.06G195300 0.5kb upstream 0.5kb upstream 500 false Chr06: 17476287-17476786 Glycine max
Glyma.06G195300 0.5kb downstream 0.5kb downstream 2936 true Chr06: 17476787-17479722 Glycine max
Glyma.06G195300 0.5kb downstream 0.5kb downstream 500 false Chr06: 17479223-17479722 Glycine max
Glyma.06G195300 1.0kb upstream 1.0kb upstream 3436 true Chr06: 17475787-17479222 Glycine max
Glyma.06G195300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17475787-17476786 Glycine max
Glyma.06G195300 1.0kb downstream 1.0kb downstream 3436 true Chr06: 17476787-17480222 Glycine max
Glyma.06G195300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17479223-17480222 Glycine max
Glyma.06G195300 2.0kb upstream 2.0kb upstream 4436 true Chr06: 17474787-17479222 Glycine max
Glyma.06G195300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17474787-17476786 Glycine max
Glyma.06G195300 2.0kb downstream 2.0kb downstream 4436 true Chr06: 17476787-17481222 Glycine max
Glyma.06G195300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17479223-17481222 Glycine max
Glyma.06G195300 5.0kb upstream 5.0kb upstream 7436 true Chr06: 17471787-17479222 Glycine max
Glyma.06G195300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17471787-17476786 Glycine max
Glyma.06G195300 5.0kb downstream 5.0kb downstream 7436 true Chr06: 17476787-17484222 Glycine max
Glyma.06G195300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17479223-17484222 Glycine max
Glyma.06G195300 10.0kb upstream 10.0kb upstream 12436 true Chr06: 17466787-17479222 Glycine max
Glyma.06G195300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17466787-17476786 Glycine max
Glyma.06G195300 10.0kb downstream 10.0kb downstream 12436 true Chr06: 17476787-17489222 Glycine max
Glyma.06G195300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17479223-17489222 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026462 5273 Angiosperm View MSA
122309033 5265 Fabidae View MSA
124067528 5270 Rosid View MSA
123743297 5271 Pentapetalae View MSA
122787099 5272 Eudicot View MSA
121347335 5274 Embryophyte View MSA
123428191 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.582 0.0 97.6008 High High
cufflinks 10.5646 0.0 30.3018   Low
cufflinks 25.9399 0.0 69.5764 High  
cufflinks 23.8815 0.0 64.2001 High  
cufflinks 23.6919 0.0 63.6731 High  
cufflinks 20.1724 0.0 54.6725    
cufflinks 8.75991 0.0 25.6182   Low
cufflinks 25.6972 0.0 68.8287 High  
cufflinks 27.9266 0.0 74.6648 High  
cufflinks 8.79     High  
cufflinks 24.697     High High
cufflinks 8.696     High  
cufflinks 8.774     High  
cufflinks 7.24     High  
cufflinks 13.819     High  
cufflinks 12.353     High  
cufflinks 16.415     High  
cufflinks 6.638       Low
cufflinks 3.968       Low
cufflinks 15.105     High  
cufflinks 19.16     High High
cufflinks 10.89     High  
cufflinks 7.011       Low
cufflinks 21.143     High High
cufflinks 14.701     High  
cufflinks 19.111     High High

0 Strain