Gene : Glyma.06G254700 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD Genomic Order:  2547
Name:  ? Glyma.06G254700 Secondary Identifier:  ? PAC:30550525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G254700 0.5kb upstream 0.5kb upstream 3555 true Chr06: 43391462-43395016 Glycine max
Glyma.06G254700 0.5kb upstream 0.5kb upstream 500 false Chr06: 43394517-43395016 Glycine max
Glyma.06G254700 0.5kb downstream 0.5kb downstream 3555 true Chr06: 43390962-43394516 Glycine max
Glyma.06G254700 0.5kb downstream 0.5kb downstream 500 false Chr06: 43390962-43391461 Glycine max
Glyma.06G254700 1.0kb upstream 1.0kb upstream 4055 true Chr06: 43391462-43395516 Glycine max
Glyma.06G254700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43394517-43395516 Glycine max
Glyma.06G254700 1.0kb downstream 1.0kb downstream 4055 true Chr06: 43390462-43394516 Glycine max
Glyma.06G254700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43390462-43391461 Glycine max
Glyma.06G254700 2.0kb upstream 2.0kb upstream 5055 true Chr06: 43391462-43396516 Glycine max
Glyma.06G254700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43394517-43396516 Glycine max
Glyma.06G254700 2.0kb downstream 2.0kb downstream 5055 true Chr06: 43389462-43394516 Glycine max
Glyma.06G254700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43389462-43391461 Glycine max
Glyma.06G254700 5.0kb upstream 5.0kb upstream 8055 true Chr06: 43391462-43399516 Glycine max
Glyma.06G254700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43394517-43399516 Glycine max
Glyma.06G254700 5.0kb downstream 5.0kb downstream 8055 true Chr06: 43386462-43394516 Glycine max
Glyma.06G254700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43386462-43391461 Glycine max
Glyma.06G254700 10.0kb upstream 10.0kb upstream 13055 true Chr06: 43391462-43404516 Glycine max
Glyma.06G254700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43394517-43404516 Glycine max
Glyma.06G254700 10.0kb downstream 10.0kb downstream 13055 true Chr06: 43381462-43394516 Glycine max
Glyma.06G254700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43381462-43391461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308388 5265 Fabidae View MSA
124065161 5270 Rosid View MSA
123739736 5271 Pentapetalae View MSA
122788599 5272 Eudicot View MSA
122042750 5273 Angiosperm View MSA
121344136 5274 Embryophyte View MSA
123426191 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.9995 0.0 20.5001    
cufflinks 7.20741 0.0 21.0407    
cufflinks 58.9168 0.0 162.075 High High
cufflinks 28.3443 0.0 75.6263 High  
cufflinks 6.14015 0.0 18.2493    
cufflinks 3.81005 0.0 12.1359   Low
cufflinks 13.3182 0.0 36.4538    
cufflinks 32.3901 0.0 86.5506 High High
cufflinks 9.39124 0.0 26.5226    
cufflinks 8.791     High High
cufflinks 6.67     High  
cufflinks 13.85     High High
cufflinks 0.302       Low
cufflinks 0.414       Low
cufflinks 4.4        
cufflinks 3.073        
cufflinks 2.385        
cufflinks 1.971        
cufflinks 2.387        
cufflinks 3.808        
cufflinks 2.411        
cufflinks 2.385        
cufflinks 1.587        
cufflinks 6.596     High  
cufflinks 3.106        
cufflinks 1.36        

0 Strain