Gene : Glyma.06G246400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31867:SF24 - EXPANSIN-A12 Genomic Order:  2464
Name:  ? Glyma.06G246400 Secondary Identifier:  ? PAC:30549733
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G246400 0.5kb upstream 0.5kb upstream 3746 true Chr06: 41635035-41638780 Glycine max
Glyma.06G246400 0.5kb upstream 0.5kb upstream 500 false Chr06: 41635035-41635534 Glycine max
Glyma.06G246400 0.5kb downstream 0.5kb downstream 3746 true Chr06: 41635535-41639280 Glycine max
Glyma.06G246400 0.5kb downstream 0.5kb downstream 500 false Chr06: 41638781-41639280 Glycine max
Glyma.06G246400 1.0kb upstream 1.0kb upstream 4246 true Chr06: 41634535-41638780 Glycine max
Glyma.06G246400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41634535-41635534 Glycine max
Glyma.06G246400 1.0kb downstream 1.0kb downstream 4246 true Chr06: 41635535-41639780 Glycine max
Glyma.06G246400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41638781-41639780 Glycine max
Glyma.06G246400 2.0kb upstream 2.0kb upstream 5246 true Chr06: 41633535-41638780 Glycine max
Glyma.06G246400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41633535-41635534 Glycine max
Glyma.06G246400 2.0kb downstream 2.0kb downstream 5246 true Chr06: 41635535-41640780 Glycine max
Glyma.06G246400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41638781-41640780 Glycine max
Glyma.06G246400 5.0kb upstream 5.0kb upstream 8246 true Chr06: 41630535-41638780 Glycine max
Glyma.06G246400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41630535-41635534 Glycine max
Glyma.06G246400 5.0kb downstream 5.0kb downstream 8246 true Chr06: 41635535-41643780 Glycine max
Glyma.06G246400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41638781-41643780 Glycine max
Glyma.06G246400 10.0kb upstream 10.0kb upstream 13246 true Chr06: 41625535-41638780 Glycine max
Glyma.06G246400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41625535-41635534 Glycine max
Glyma.06G246400 10.0kb downstream 10.0kb downstream 13246 true Chr06: 41635535-41648780 Glycine max
Glyma.06G246400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41638781-41648780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309204 5265 Fabidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0545924 0.0 0.225966 Low  
cufflinks 0.0540704 0.0 0.22422 Low  
cufflinks 0.0791058 0.0 0.320692 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.388034 0.0 1.47808    
cufflinks 0.5114 0.0 1.92445   High
cufflinks 0.0313472 0.0 0.135009 Low Low
cufflinks 0.0533892 0.0 0.221098 Low  
cufflinks 0.577976 0.0 2.16154   High
cufflinks 0.194        
cufflinks 0.569       High
cufflinks 0.045     Low  
cufflinks 0.563       High
cufflinks 1.052       High
cufflinks 0.103        
cufflinks 0.015     Low  
cufflinks 0.293        
cufflinks 0.06     Low  
cufflinks 0.009     Low Low
cufflinks 0.006     Low Low
cufflinks 0.166        
cufflinks 0.005     Low Low
cufflinks 0.02     Low  
cufflinks 0.197        
cufflinks 0.02     Low  
cufflinks 0.52       High

0 Strain