Gene : Glyma.06G246600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER Genomic Order:  2466
Name:  ? Glyma.06G246600 Secondary Identifier:  ? PAC:30551739
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G246600 0.5kb upstream 0.5kb upstream 7854 true Chr06: 41654379-41662232 Glycine max
Glyma.06G246600 0.5kb upstream 0.5kb upstream 500 false Chr06: 41654379-41654878 Glycine max
Glyma.06G246600 0.5kb downstream 0.5kb downstream 7854 true Chr06: 41654879-41662732 Glycine max
Glyma.06G246600 0.5kb downstream 0.5kb downstream 500 false Chr06: 41662233-41662732 Glycine max
Glyma.06G246600 1.0kb upstream 1.0kb upstream 8354 true Chr06: 41653879-41662232 Glycine max
Glyma.06G246600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41653879-41654878 Glycine max
Glyma.06G246600 1.0kb downstream 1.0kb downstream 8354 true Chr06: 41654879-41663232 Glycine max
Glyma.06G246600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41662233-41663232 Glycine max
Glyma.06G246600 2.0kb upstream 2.0kb upstream 9354 true Chr06: 41652879-41662232 Glycine max
Glyma.06G246600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41652879-41654878 Glycine max
Glyma.06G246600 2.0kb downstream 2.0kb downstream 9354 true Chr06: 41654879-41664232 Glycine max
Glyma.06G246600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41662233-41664232 Glycine max
Glyma.06G246600 5.0kb upstream 5.0kb upstream 12354 true Chr06: 41649879-41662232 Glycine max
Glyma.06G246600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41649879-41654878 Glycine max
Glyma.06G246600 5.0kb downstream 5.0kb downstream 12354 true Chr06: 41654879-41667232 Glycine max
Glyma.06G246600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41662233-41667232 Glycine max
Glyma.06G246600 10.0kb upstream 10.0kb upstream 17354 true Chr06: 41644879-41662232 Glycine max
Glyma.06G246600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41644879-41654878 Glycine max
Glyma.06G246600 10.0kb downstream 10.0kb downstream 17354 true Chr06: 41654879-41672232 Glycine max
Glyma.06G246600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41662233-41672232 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299366 5265 Fabidae View MSA
124068614 5270 Rosid View MSA
123746416 5271 Pentapetalae View MSA
122790584 5272 Eudicot View MSA
122045224 5273 Angiosperm View MSA
121347248 5274 Embryophyte View MSA
123428295 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.92873 0.0 13.8717    
cufflinks 10.8304 0.0 28.9728    
cufflinks 2.48277 0.0 7.58135   Low
cufflinks 11.9891 0.0 32.0121   High
cufflinks 9.80889 0.0 26.3344    
cufflinks 2.79759 0.0 8.4398   Low
cufflinks 7.77221 0.0 21.0964    
cufflinks 9.63145 0.0 25.8457    
cufflinks 7.63782 0.0 20.7185    
cufflinks 2.867        
cufflinks 0.177       Low
cufflinks 1.767        
cufflinks 2.77        
cufflinks 4.266       High
cufflinks 0.506       Low
cufflinks 2.261        
cufflinks 0.687        
cufflinks 3.057        
cufflinks 3.596       High
cufflinks 2.35        
cufflinks 0.45       Low
cufflinks 2.207        
cufflinks 2.295        
cufflinks 0.349       Low
cufflinks 2.223        
cufflinks 0.678        

0 Strain