Gene : Glyma.06G234200 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase Genomic Order:  2342
Name:  ? Glyma.06G234200 Secondary Identifier:  ? PAC:30552335
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G234200 0.5kb upstream 0.5kb upstream 5814 true Chr06: 37624447-37630260 Glycine max
Glyma.06G234200 0.5kb upstream 0.5kb upstream 500 false Chr06: 37629761-37630260 Glycine max
Glyma.06G234200 0.5kb downstream 0.5kb downstream 5814 true Chr06: 37623947-37629760 Glycine max
Glyma.06G234200 0.5kb downstream 0.5kb downstream 500 false Chr06: 37623947-37624446 Glycine max
Glyma.06G234200 1.0kb upstream 1.0kb upstream 6314 true Chr06: 37624447-37630760 Glycine max
Glyma.06G234200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 37629761-37630760 Glycine max
Glyma.06G234200 1.0kb downstream 1.0kb downstream 6314 true Chr06: 37623447-37629760 Glycine max
Glyma.06G234200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 37623447-37624446 Glycine max
Glyma.06G234200 2.0kb upstream 2.0kb upstream 7314 true Chr06: 37624447-37631760 Glycine max
Glyma.06G234200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 37629761-37631760 Glycine max
Glyma.06G234200 2.0kb downstream 2.0kb downstream 7314 true Chr06: 37622447-37629760 Glycine max
Glyma.06G234200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 37622447-37624446 Glycine max
Glyma.06G234200 5.0kb upstream 5.0kb upstream 10314 true Chr06: 37624447-37634760 Glycine max
Glyma.06G234200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 37629761-37634760 Glycine max
Glyma.06G234200 5.0kb downstream 5.0kb downstream 10314 true Chr06: 37619447-37629760 Glycine max
Glyma.06G234200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 37619447-37624446 Glycine max
Glyma.06G234200 10.0kb upstream 10.0kb upstream 15314 true Chr06: 37624447-37639760 Glycine max
Glyma.06G234200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 37629761-37639760 Glycine max
Glyma.06G234200 10.0kb downstream 10.0kb downstream 15314 true Chr06: 37614447-37629760 Glycine max
Glyma.06G234200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 37614447-37624446 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302891 5265 Fabidae View MSA
124064618 5270 Rosid View MSA
123740810 5271 Pentapetalae View MSA
122786399 5272 Eudicot View MSA
122042428 5273 Angiosperm View MSA
121346859 5274 Embryophyte View MSA
123424235 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.80809 0.0 9.32025    
cufflinks 1.70126 0.0 5.96115    
cufflinks 3.2804 0.0 10.6859    
cufflinks 2.32986 0.0 7.91905    
cufflinks 5.44112 0.0 16.4287    
cufflinks 10.8077 0.0 30.0508   High
cufflinks 1.77467 0.0 6.18862    
cufflinks 1.07942 0.0 3.90428   Low
cufflinks 4.33019 0.0 13.5166    
cufflinks 3.139       High
cufflinks 1.353        
cufflinks 2.769       High
cufflinks 2.149        
cufflinks 1.511        
cufflinks 2.069        
cufflinks 0.366       Low
cufflinks 2.347        
cufflinks 2.068        
cufflinks 1.871        
cufflinks 0.41       Low
cufflinks 0.751        
cufflinks 0.375       Low
cufflinks 3.6       High
cufflinks 1.107        
cufflinks 0.346       Low
cufflinks 0.922        

0 Strain