Gene : Glyma.06G228800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31104:SF1 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K15M2 Genomic Order:  2288
Name:  ? Glyma.06G228800 Secondary Identifier:  ? PAC:30549829
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G228800 0.5kb upstream 0.5kb upstream 2964 true Chr06: 34750552-34753515 Glycine max
Glyma.06G228800 0.5kb upstream 0.5kb upstream 500 false Chr06: 34753016-34753515 Glycine max
Glyma.06G228800 0.5kb downstream 0.5kb downstream 2964 true Chr06: 34750052-34753015 Glycine max
Glyma.06G228800 0.5kb downstream 0.5kb downstream 500 false Chr06: 34750052-34750551 Glycine max
Glyma.06G228800 1.0kb upstream 1.0kb upstream 3464 true Chr06: 34750552-34754015 Glycine max
Glyma.06G228800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 34753016-34754015 Glycine max
Glyma.06G228800 1.0kb downstream 1.0kb downstream 3464 true Chr06: 34749552-34753015 Glycine max
Glyma.06G228800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 34749552-34750551 Glycine max
Glyma.06G228800 2.0kb upstream 2.0kb upstream 4464 true Chr06: 34750552-34755015 Glycine max
Glyma.06G228800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 34753016-34755015 Glycine max
Glyma.06G228800 2.0kb downstream 2.0kb downstream 4464 true Chr06: 34748552-34753015 Glycine max
Glyma.06G228800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 34748552-34750551 Glycine max
Glyma.06G228800 5.0kb upstream 5.0kb upstream 7464 true Chr06: 34750552-34758015 Glycine max
Glyma.06G228800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 34753016-34758015 Glycine max
Glyma.06G228800 5.0kb downstream 5.0kb downstream 7464 true Chr06: 34745552-34753015 Glycine max
Glyma.06G228800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 34745552-34750551 Glycine max
Glyma.06G228800 10.0kb upstream 10.0kb upstream 12464 true Chr06: 34750552-34763015 Glycine max
Glyma.06G228800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 34753016-34763015 Glycine max
Glyma.06G228800 10.0kb downstream 10.0kb downstream 12464 true Chr06: 34740552-34753015 Glycine max
Glyma.06G228800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 34740552-34750551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303010 5265 Fabidae View MSA
124072866 5270 Rosid View MSA
123749062 5271 Pentapetalae View MSA
122793704 5272 Eudicot View MSA
122047638 5273 Angiosperm View MSA
121344579 5274 Embryophyte View MSA
123380069 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21446 0.0 4.1192   Low
cufflinks 10.9494 0.0 29.3012    
cufflinks 2.21408 0.0 6.90992   Low
cufflinks 4.95817 0.0 13.9539    
cufflinks 6.35644 0.0 17.5068    
cufflinks 3.31 0.0 9.77561    
cufflinks 14.8546 0.0 39.6398   High
cufflinks 12.0272 0.0 32.1174   High
cufflinks 5.44103 0.0 15.169    
cufflinks 9.431     High  
cufflinks 0.391       Low
cufflinks 4.235        
cufflinks 7.525     High  
cufflinks 6.287        
cufflinks 0.608       Low
cufflinks 6.184        
cufflinks 1.978        
cufflinks 6.378        
cufflinks 13.69     High High
cufflinks 4.875        
cufflinks 0.708       Low
cufflinks 5.371        
cufflinks 6.602        
cufflinks 0.522       Low
cufflinks 5.303        
cufflinks 1.542        

0 Strain