Gene : Glyma.06G232300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Genomic Order:  2323
Name:  ? Glyma.06G232300 Secondary Identifier:  ? PAC:30553229
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G232300 0.5kb upstream 0.5kb upstream 3494 true Chr06: 36693272-36696765 Glycine max
Glyma.06G232300 0.5kb upstream 0.5kb upstream 500 false Chr06: 36693272-36693771 Glycine max
Glyma.06G232300 0.5kb downstream 0.5kb downstream 3494 true Chr06: 36693772-36697265 Glycine max
Glyma.06G232300 0.5kb downstream 0.5kb downstream 500 false Chr06: 36696766-36697265 Glycine max
Glyma.06G232300 1.0kb upstream 1.0kb upstream 3994 true Chr06: 36692772-36696765 Glycine max
Glyma.06G232300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 36692772-36693771 Glycine max
Glyma.06G232300 1.0kb downstream 1.0kb downstream 3994 true Chr06: 36693772-36697765 Glycine max
Glyma.06G232300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 36696766-36697765 Glycine max
Glyma.06G232300 2.0kb upstream 2.0kb upstream 4994 true Chr06: 36691772-36696765 Glycine max
Glyma.06G232300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 36691772-36693771 Glycine max
Glyma.06G232300 2.0kb downstream 2.0kb downstream 4994 true Chr06: 36693772-36698765 Glycine max
Glyma.06G232300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 36696766-36698765 Glycine max
Glyma.06G232300 5.0kb upstream 5.0kb upstream 7994 true Chr06: 36688772-36696765 Glycine max
Glyma.06G232300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 36688772-36693771 Glycine max
Glyma.06G232300 5.0kb downstream 5.0kb downstream 7994 true Chr06: 36693772-36701765 Glycine max
Glyma.06G232300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 36696766-36701765 Glycine max
Glyma.06G232300 10.0kb upstream 10.0kb upstream 12994 true Chr06: 36683772-36696765 Glycine max
Glyma.06G232300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 36683772-36693771 Glycine max
Glyma.06G232300 10.0kb downstream 10.0kb downstream 12994 true Chr06: 36693772-36706765 Glycine max
Glyma.06G232300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 36696766-36706765 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304327 5265 Fabidae View MSA
124070231 5270 Rosid View MSA
123742325 5271 Pentapetalae View MSA
122789743 5272 Eudicot View MSA
122046366 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.55119 0.0 15.1145    
cufflinks 11.6334 0.0 31.0434    
cufflinks 0.621837 0.0 2.19694   Low
cufflinks 5.29182 0.0 14.4626    
cufflinks 1.39846 0.0 4.46016    
cufflinks 1.85942 0.0 5.71591    
cufflinks 38.1774 0.0 112.033 High High
cufflinks 0.805189 0.0 2.76917   Low
cufflinks 2.77024 0.0 8.07867    
cufflinks 0.542       Low
cufflinks 0.379       Low
cufflinks 3.287        
cufflinks 4.98        
cufflinks 2.195        
cufflinks 0.462       Low
cufflinks 19.6     High High
cufflinks 0.666        
cufflinks 15.682     High High
cufflinks 3.455        
cufflinks 18.834     High High
cufflinks 0.688        
cufflinks 23.741     High High
cufflinks 27.607     High High
cufflinks 0.549       Low
cufflinks 19.645     High High
cufflinks 1.058        

0 Strain