Gene : Glyma.06G292400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  2924
Name:  ? Glyma.06G292400 Secondary Identifier:  ? PAC:30552697
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G292400 0.5kb upstream 0.5kb upstream 5160 true Chr06: 48129796-48134955 Glycine max
Glyma.06G292400 0.5kb upstream 0.5kb upstream 500 false Chr06: 48129796-48130295 Glycine max
Glyma.06G292400 0.5kb downstream 0.5kb downstream 5160 true Chr06: 48130296-48135455 Glycine max
Glyma.06G292400 0.5kb downstream 0.5kb downstream 500 false Chr06: 48134956-48135455 Glycine max
Glyma.06G292400 1.0kb upstream 1.0kb upstream 5660 true Chr06: 48129296-48134955 Glycine max
Glyma.06G292400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48129296-48130295 Glycine max
Glyma.06G292400 1.0kb downstream 1.0kb downstream 5660 true Chr06: 48130296-48135955 Glycine max
Glyma.06G292400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48134956-48135955 Glycine max
Glyma.06G292400 2.0kb upstream 2.0kb upstream 6660 true Chr06: 48128296-48134955 Glycine max
Glyma.06G292400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48128296-48130295 Glycine max
Glyma.06G292400 2.0kb downstream 2.0kb downstream 6660 true Chr06: 48130296-48136955 Glycine max
Glyma.06G292400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48134956-48136955 Glycine max
Glyma.06G292400 5.0kb upstream 5.0kb upstream 9660 true Chr06: 48125296-48134955 Glycine max
Glyma.06G292400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48125296-48130295 Glycine max
Glyma.06G292400 5.0kb downstream 5.0kb downstream 9660 true Chr06: 48130296-48139955 Glycine max
Glyma.06G292400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48134956-48139955 Glycine max
Glyma.06G292400 10.0kb upstream 10.0kb upstream 14660 true Chr06: 48120296-48134955 Glycine max
Glyma.06G292400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48120296-48130295 Glycine max
Glyma.06G292400 10.0kb downstream 10.0kb downstream 14660 true Chr06: 48130296-48144955 Glycine max
Glyma.06G292400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48134956-48144955 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314019 5265 Fabidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.3032 0.0 33.9132    
cufflinks 9.74897 0.0 35.3021    
cufflinks 4.97504 0.0 17.3638   Low
cufflinks 12.594 0.0 44.3869    
cufflinks 19.983 0.0 70.451 High  
cufflinks 31.3532 0.0 118.019 High High
cufflinks 14.5598 0.0 51.2792    
cufflinks 42.737 0.0 173.265 High High
cufflinks 20.8249 0.0 73.9755 High  
cufflinks 7.258       High
cufflinks 1.606       Low
cufflinks 1.991       Low
cufflinks 7.115       High
cufflinks 6.613       High
cufflinks 2.502        
cufflinks 3.017        
cufflinks 2.311        
cufflinks 3.283        
cufflinks 3.125        
cufflinks 2.431        
cufflinks 5.317       High
cufflinks 2.799        
cufflinks 2.302        
cufflinks 4.06        
cufflinks 2.458        
cufflinks 4.251        

0 Strain