Gene : Glyma.06G293300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  2933
Name:  ? Glyma.06G293300 Secondary Identifier:  ? PAC:30552321
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G293300 0.5kb upstream 0.5kb upstream 3833 true Chr06: 48198132-48201964 Glycine max
Glyma.06G293300 0.5kb upstream 0.5kb upstream 500 false Chr06: 48201465-48201964 Glycine max
Glyma.06G293300 0.5kb downstream 0.5kb downstream 3833 true Chr06: 48197632-48201464 Glycine max
Glyma.06G293300 0.5kb downstream 0.5kb downstream 500 false Chr06: 48197632-48198131 Glycine max
Glyma.06G293300 1.0kb upstream 1.0kb upstream 4333 true Chr06: 48198132-48202464 Glycine max
Glyma.06G293300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48201465-48202464 Glycine max
Glyma.06G293300 1.0kb downstream 1.0kb downstream 4333 true Chr06: 48197132-48201464 Glycine max
Glyma.06G293300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48197132-48198131 Glycine max
Glyma.06G293300 2.0kb upstream 2.0kb upstream 5333 true Chr06: 48198132-48203464 Glycine max
Glyma.06G293300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48201465-48203464 Glycine max
Glyma.06G293300 2.0kb downstream 2.0kb downstream 5333 true Chr06: 48196132-48201464 Glycine max
Glyma.06G293300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48196132-48198131 Glycine max
Glyma.06G293300 5.0kb upstream 5.0kb upstream 8333 true Chr06: 48198132-48206464 Glycine max
Glyma.06G293300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48201465-48206464 Glycine max
Glyma.06G293300 5.0kb downstream 5.0kb downstream 8333 true Chr06: 48193132-48201464 Glycine max
Glyma.06G293300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48193132-48198131 Glycine max
Glyma.06G293300 10.0kb upstream 10.0kb upstream 13333 true Chr06: 48198132-48211464 Glycine max
Glyma.06G293300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48201465-48211464 Glycine max
Glyma.06G293300 10.0kb downstream 10.0kb downstream 13333 true Chr06: 48188132-48201464 Glycine max
Glyma.06G293300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48188132-48198131 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309501 5265 Fabidae View MSA
124072750 5270 Rosid View MSA
123750989 5271 Pentapetalae View MSA
122787745 5272 Eudicot View MSA
122045868 5273 Angiosperm View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0293335 0.0 0.133028 Low Low
cufflinks 22.0167 0.0 60.1987 High High
cufflinks 0.375814 0.0 1.46452    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.337525 0.0 1.32016    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.921       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.335       High
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.007     Low  
cufflinks 0.005     Low  

0 Strain