Gene : Glyma.06G293700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19282:SF158 - TETRASPANIN-19 Genomic Order:  2937
Name:  ? Glyma.06G293700 Secondary Identifier:  ? PAC:30553197
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G293700 0.5kb upstream 0.5kb upstream 12912 true Chr06: 48252649-48265560 Glycine max
Glyma.06G293700 0.5kb upstream 0.5kb upstream 500 false Chr06: 48252649-48253148 Glycine max
Glyma.06G293700 0.5kb downstream 0.5kb downstream 12912 true Chr06: 48253149-48266060 Glycine max
Glyma.06G293700 0.5kb downstream 0.5kb downstream 500 false Chr06: 48265561-48266060 Glycine max
Glyma.06G293700 1.0kb upstream 1.0kb upstream 13412 true Chr06: 48252149-48265560 Glycine max
Glyma.06G293700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48252149-48253148 Glycine max
Glyma.06G293700 1.0kb downstream 1.0kb downstream 13412 true Chr06: 48253149-48266560 Glycine max
Glyma.06G293700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48265561-48266560 Glycine max
Glyma.06G293700 2.0kb upstream 2.0kb upstream 14412 true Chr06: 48251149-48265560 Glycine max
Glyma.06G293700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48251149-48253148 Glycine max
Glyma.06G293700 2.0kb downstream 2.0kb downstream 14412 true Chr06: 48253149-48267560 Glycine max
Glyma.06G293700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48265561-48267560 Glycine max
Glyma.06G293700 5.0kb upstream 5.0kb upstream 17412 true Chr06: 48248149-48265560 Glycine max
Glyma.06G293700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48248149-48253148 Glycine max
Glyma.06G293700 5.0kb downstream 5.0kb downstream 17412 true Chr06: 48253149-48270560 Glycine max
Glyma.06G293700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48265561-48270560 Glycine max
Glyma.06G293700 10.0kb upstream 10.0kb upstream 22412 true Chr06: 48243149-48265560 Glycine max
Glyma.06G293700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48243149-48253148 Glycine max
Glyma.06G293700 10.0kb downstream 10.0kb downstream 22412 true Chr06: 48253149-48275560 Glycine max
Glyma.06G293700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48265561-48275560 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041111 5273 Angiosperm View MSA
122307421 5265 Fabidae View MSA
124072815 5270 Rosid View MSA
123745432 5271 Pentapetalae View MSA
122787617 5272 Eudicot View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.4476 0.0 137.344 High  
cufflinks 16.6525 0.0 63.1873   Low
cufflinks 38.5862 0.0 140.711 High  
cufflinks 31.1481 0.0 111.904 High  
cufflinks 28.0673 0.0 101.524 High  
cufflinks 30.894 0.0 115.943 High  
cufflinks 35.6912 0.0 130.093 High  
cufflinks 33.3421 0.0 122.848 High  
cufflinks 40.8163 0.0 148.37 High  
cufflinks 1.152       Low
cufflinks 2.924       High
cufflinks 1.775        
cufflinks 1.139       Low
cufflinks 1.272        
cufflinks 2.434       High
cufflinks 1.349        
cufflinks 1.505        
cufflinks 1.633        
cufflinks 1.067       Low
cufflinks 1.671        
cufflinks 1.958        
cufflinks 1.577        
cufflinks 1.018       Low
cufflinks 2.5       High
cufflinks 1.646        
cufflinks 1.621        

0 Strain