Gene : PhHAL.1G238300 P. hallii HAL v2.1
Defline:  (1 of 1) PTHR11079//PTHR11079:SF85 - CYTOSINE DEAMINASE // RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  1749
Name:  ? PhHAL.1G238300 Secondary Identifier:  ? PAC:40415940
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL RIBOSYN2-PWY Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G238300 0.5kb upstream 0.5kb upstream 6810 true Chr01: 43409364-43416173 Panicum hallii HAL
PhHAL.1G238300 0.5kb upstream 0.5kb upstream 500 false Chr01: 43409364-43409863 Panicum hallii HAL
PhHAL.1G238300 0.5kb downstream 0.5kb downstream 6810 true Chr01: 43409864-43416673 Panicum hallii HAL
PhHAL.1G238300 0.5kb downstream 0.5kb downstream 500 false Chr01: 43416174-43416673 Panicum hallii HAL
PhHAL.1G238300 1.0kb upstream 1.0kb upstream 7310 true Chr01: 43408864-43416173 Panicum hallii HAL
PhHAL.1G238300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43408864-43409863 Panicum hallii HAL
PhHAL.1G238300 1.0kb downstream 1.0kb downstream 7310 true Chr01: 43409864-43417173 Panicum hallii HAL
PhHAL.1G238300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43416174-43417173 Panicum hallii HAL
PhHAL.1G238300 2.0kb upstream 2.0kb upstream 8310 true Chr01: 43407864-43416173 Panicum hallii HAL
PhHAL.1G238300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43407864-43409863 Panicum hallii HAL
PhHAL.1G238300 2.0kb downstream 2.0kb downstream 8310 true Chr01: 43409864-43418173 Panicum hallii HAL
PhHAL.1G238300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43416174-43418173 Panicum hallii HAL
PhHAL.1G238300 5.0kb upstream 5.0kb upstream 11310 true Chr01: 43404864-43416173 Panicum hallii HAL
PhHAL.1G238300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43404864-43409863 Panicum hallii HAL
PhHAL.1G238300 5.0kb downstream 5.0kb downstream 11310 true Chr01: 43409864-43421173 Panicum hallii HAL
PhHAL.1G238300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43416174-43421173 Panicum hallii HAL
PhHAL.1G238300 10.0kb upstream 10.0kb upstream 16310 true Chr01: 43399864-43416173 Panicum hallii HAL
PhHAL.1G238300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43399864-43409863 Panicum hallii HAL
PhHAL.1G238300 10.0kb downstream 10.0kb downstream 16310 true Chr01: 43409864-43426173 Panicum hallii HAL
PhHAL.1G238300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43416174-43426173 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187188 5267 Panicoideae View MSA
124570511 5269 Grass View MSA
122047695 5273 Angiosperm View MSA
121349064 5274 Embryophyte View MSA
123426945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier