Gene : PhHAL.1G053000 P. hallii HAL v2.1
Defline:  (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I Genomic Order:  519
Name:  ? PhHAL.1G053000 Secondary Identifier:  ? PAC:40413487
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G053000 0.5kb upstream 0.5kb upstream 4683 true Chr01: 3148290-3152972 Panicum hallii HAL
PhHAL.1G053000 0.5kb upstream 0.5kb upstream 500 false Chr01: 3148290-3148789 Panicum hallii HAL
PhHAL.1G053000 0.5kb downstream 0.5kb downstream 4683 true Chr01: 3148790-3153472 Panicum hallii HAL
PhHAL.1G053000 0.5kb downstream 0.5kb downstream 500 false Chr01: 3152973-3153472 Panicum hallii HAL
PhHAL.1G053000 1.0kb upstream 1.0kb upstream 5183 true Chr01: 3147790-3152972 Panicum hallii HAL
PhHAL.1G053000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3147790-3148789 Panicum hallii HAL
PhHAL.1G053000 1.0kb downstream 1.0kb downstream 5183 true Chr01: 3148790-3153972 Panicum hallii HAL
PhHAL.1G053000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3152973-3153972 Panicum hallii HAL
PhHAL.1G053000 2.0kb upstream 2.0kb upstream 6183 true Chr01: 3146790-3152972 Panicum hallii HAL
PhHAL.1G053000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3146790-3148789 Panicum hallii HAL
PhHAL.1G053000 2.0kb downstream 2.0kb downstream 6183 true Chr01: 3148790-3154972 Panicum hallii HAL
PhHAL.1G053000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3152973-3154972 Panicum hallii HAL
PhHAL.1G053000 5.0kb upstream 5.0kb upstream 9183 true Chr01: 3143790-3152972 Panicum hallii HAL
PhHAL.1G053000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3143790-3148789 Panicum hallii HAL
PhHAL.1G053000 5.0kb downstream 5.0kb downstream 9183 true Chr01: 3148790-3157972 Panicum hallii HAL
PhHAL.1G053000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3152973-3157972 Panicum hallii HAL
PhHAL.1G053000 10.0kb upstream 10.0kb upstream 14183 true Chr01: 3138790-3152972 Panicum hallii HAL
PhHAL.1G053000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3138790-3148789 Panicum hallii HAL
PhHAL.1G053000 10.0kb downstream 10.0kb downstream 14183 true Chr01: 3148790-3162972 Panicum hallii HAL
PhHAL.1G053000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3152973-3162972 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182429 5267 Panicoideae View MSA
124579399 5269 Grass View MSA
122042200 5273 Angiosperm View MSA
121348163 5274 Embryophyte View MSA
123426103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier