Protein Family : RNA binding protein, putative, expressed 123426103

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  66

66 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
99851 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I S. moellendorffii v1.0 1607   scaffold_22: 212888-214494
30125.t000019 (1 of 1) PTHR11061//PTHR11061:SF12 - RNA M5U METHYLTRANSFERASE FAMILY // RNA BINDING PROTEIN-RELATED R. communis v0.1 6097   30125: 1179607-1185703
Cucsa.118570 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I C. sativus v1.0 4724   scaffold00998: 450012-454735
AT1G54310 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I A. thaliana TAIR10 2008   Chr1: 20273567-20275574
Thhalv10011478m.g (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I E. salsugineum v1.0 2149   scaffold_7: 48975-51123
Ciclev10004974m.g (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I C. clementina v1.0 4013   scaffold_9: 31010083-31014095
Gorai.001G051600 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I G. raimondii v2.1 8636   Chr01: 4897004-4905639
MicpuC2.estExt_fgenesh1_pm.C_170021 (1 of 1) PTHR11061:SF12 - RNA BINDING PROTEIN-RELATED M. pusilla CCMP1545 v3.0 1557   scaffold_17: 382511-384067
gw2.03.254.1 (1 of 2) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I M. sp RCC299 v3.0 1365   Chr_03: 1514796-1516160
e_gwEuk.17.77.1 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I O. lucimarinus v2.0 1482   Chr_17: 210514-211995
Thecc1EG033582 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I T. cacao v1.1 9845   scaffold_7: 22837780-22847624
Migut.M01505 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I M. guttatus v2.0 2515   scaffold_13: 18721894-18724408
Araha.35607s0007 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I A. halleri v1.1 1826   Scaffold35607: 20854-22679
Cagra.0349s0003 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I C. grandiflora v1.1 2022   Scaffold349: 6748-8769
Glyma.08G234700 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I G. max Wm82.a2.v1 23951   Chr08: 19684179-19708129
Brara.E02017 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I B. rapa FPsc v1.3 1869   A05: 18409935-18411803
Bostr.6758s0076 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I B. stricta v1.2 1974   Scaffold6758: 402882-404855
Cre16.g649400 (1 of 1) PTHR11061//PTHR11061:SF12 - RNA M5U METHYLTRANSFERASE FAMILY // RNA BINDING PROTEIN-RELATED C. reinhardtii v5.6 CPLD16 5273   chromosome_16: 1042756-1048028
Cre09.g407900 (1 of 1) PTHR11061//PTHR11061:SF15 - RNA M5U METHYLTRANSFERASE FAMILY // SUBFAMILY NOT NAMED C. reinhardtii v5.6 6282   chromosome_9: 6545258-6551539
SapurV1A.0093s0190 (1 of 1) PTHR11061//PTHR11061:SF12 - RNA M5U METHYLTRANSFERASE FAMILY // RNA BINDING PROTEIN-RELATED S. purpurea v1.0 4972   chr10: 13484873-13489844
evm_27.TU.AmTr_v1.0_scaffold00032.196 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I A. trichopoda v1.0 12278   AmTr_v1.0_scaffold00032: 3880318-3892595
Traes_6AS_0CD8379D0 (1 of 4) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I T. aestivum v2.2 2965   ta_iwgsc_6as_v1_4382974: 1-2965
Traes_6BS_0DD7912A4 (1 of 4) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I T. aestivum v2.2 3460   ta_iwgsc_6bs_v1_146344: 2994-6453
Traes_6DS_1DBF87531 (1 of 4) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I T. aestivum v2.2 6174   ta_iwgsc_6ds_v1_2086887: 11187-17360
Eucgr.K03462 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I E. grandis v2.0 4782   Chr11: 43052037-43056818
Prupe.4G128300 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I P. persica v2.1 4950   Pp04: 7059389-7064338
GSMUA_Achr11G18230_001 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I M. acuminata v1 3283   chr11: 19645015-19648297
Manes.16G047900 (1 of 2) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I M. esculenta v6.1 6198   Chromosome16: 7838086-7844283
Seita.1G069700 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I S. italica v2.2 5110   scaffold_1: 6444330-6449439
Bradi3g05437 (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I B. distachyon v3.1 6333   Bd3: 3836177-3842509

66 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
99851 S. moellendorffii v1.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
30125.m001262 R. communis v0.1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Cucsa.118570.1 C. sativus v1.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
AT1G54310.2 A. thaliana TAIR10 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Thhalv10011478m E. salsugineum v1.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Ciclev10004974m C. clementina v1.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Gorai.001G051600.1 G. raimondii v2.1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
46042 M. pusilla CCMP1545 v3.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
68263 M. sp RCC299 v3.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
41962 O. lucimarinus v2.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Thecc1EG033582t1 T. cacao v1.1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Migut.M01505.1.p M. guttatus v2.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Araha.35607s0007.1.p A. halleri v1.1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Cagra.0349s0003.1.p C. grandiflora v1.1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Glyma.08G234700.1.p G. max Wm82.a2.v1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Brara.E02017.1.p B. rapa FPsc v1.3 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Bostr.6758s0076.1.p B. stricta v1.2 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Cre16.g649400.t1.2 C. reinhardtii v5.6 123426103 RNA binding protein, putative, expressed 2 5275 Viridiplantae
Cre09.g407900.t1.2 C. reinhardtii v5.6 123426103 RNA binding protein, putative, expressed 2 5275 Viridiplantae
SapurV1A.0093s0190.1.p S. purpurea v1.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00032.196 A. trichopoda v1.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Traes_6AS_0CD8379D0.1 T. aestivum v2.2 123426103 RNA binding protein, putative, expressed 3 5275 Viridiplantae
Traes_6DS_1DBF87531.2 T. aestivum v2.2 123426103 RNA binding protein, putative, expressed 3 5275 Viridiplantae
Traes_6BS_0DD7912A4.1 T. aestivum v2.2 123426103 RNA binding protein, putative, expressed 3 5275 Viridiplantae
Eucgr.K03462.1.p E. grandis v2.0 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Prupe.4G128300.1.p P. persica v2.1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
GSMUA_Achr11P18230_001 M. acuminata v1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Manes.16G047900.1.p M. esculenta v6.1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Seita.1G069700.1.p S. italica v2.2 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae
Bradi3g05437.2.p B. distachyon v3.1 123426103 RNA binding protein, putative, expressed 1 5275 Viridiplantae