Gene : CPLD16 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g649400 Defline:  (1 of 1) PTHR11061//PTHR11061:SF12 - RNA M5U METHYLTRANSFERASE FAMILY // RNA BINDING PROTEIN-RELATED
Genomic Order:  169 Name:  ? Cre16.g649400
Secondary Identifier:  ? PAC:30776942
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g649400 0.5kb upstream 0.5kb upstream 5773 true chromosome_16: 1042256-1048028 Chlamydomonas reinhardtii
Cre16.g649400 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1042256-1042755 Chlamydomonas reinhardtii
Cre16.g649400 0.5kb downstream 0.5kb downstream 5773 true chromosome_16: 1042756-1048528 Chlamydomonas reinhardtii
Cre16.g649400 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1048029-1048528 Chlamydomonas reinhardtii
Cre16.g649400 1.0kb upstream 1.0kb upstream 6273 true chromosome_16: 1041756-1048028 Chlamydomonas reinhardtii
Cre16.g649400 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1041756-1042755 Chlamydomonas reinhardtii
Cre16.g649400 1.0kb downstream 1.0kb downstream 6273 true chromosome_16: 1042756-1049028 Chlamydomonas reinhardtii
Cre16.g649400 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1048029-1049028 Chlamydomonas reinhardtii
Cre16.g649400 2.0kb upstream 2.0kb upstream 7273 true chromosome_16: 1040756-1048028 Chlamydomonas reinhardtii
Cre16.g649400 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1040756-1042755 Chlamydomonas reinhardtii
Cre16.g649400 2.0kb downstream 2.0kb downstream 7273 true chromosome_16: 1042756-1050028 Chlamydomonas reinhardtii
Cre16.g649400 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1048029-1050028 Chlamydomonas reinhardtii
Cre16.g649400 5.0kb upstream 5.0kb upstream 10273 true chromosome_16: 1037756-1048028 Chlamydomonas reinhardtii
Cre16.g649400 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1037756-1042755 Chlamydomonas reinhardtii
Cre16.g649400 5.0kb downstream 5.0kb downstream 10273 true chromosome_16: 1042756-1053028 Chlamydomonas reinhardtii
Cre16.g649400 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1048029-1053028 Chlamydomonas reinhardtii
Cre16.g649400 10.0kb upstream 10.0kb upstream 15273 true chromosome_16: 1032756-1048028 Chlamydomonas reinhardtii
Cre16.g649400 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1032756-1042755 Chlamydomonas reinhardtii
Cre16.g649400 10.0kb downstream 10.0kb downstream 15273 true chromosome_16: 1042756-1058028 Chlamydomonas reinhardtii
Cre16.g649400 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1048029-1058028 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111191 5260 Chlorophyte View MSA
123426103 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.811        
cufflinks 2.516        
cufflinks 1.537        
cufflinks 1.868        
cufflinks 1.985        
cufflinks 1.748        
cufflinks 2.023        
cufflinks 1.691        
cufflinks 0.596        
cufflinks 0.614        
cufflinks 2.102        
cufflinks 1.833        
cufflinks 0.677        
cufflinks 2.189        
cufflinks 1.315        
cufflinks 1.793        
cufflinks 0.145       Low
cufflinks 1.538        
cufflinks 0.574        
cufflinks 1.993        
cufflinks 1.401        
cufflinks 0.226       Low
cufflinks 2.024        
cufflinks 1.995        
cufflinks 0.094     Low Low
cufflinks 8.88106 1.20937 16.5528   Low
cufflinks 16.7092 4.49085 28.9276   High
cufflinks 0.677859 0.0 1.78918   Low
cufflinks 5.65097 0.948673 10.3533   Low
cufflinks 14.2518 2.65931 25.8443   High

0 Strain