Gene : Thecc1EG033582 T. cacao v1.1
Defline:  (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I Genomic Order:  1812
Name:  ? Thecc1EG033582 Secondary Identifier:  ? PAC:27446084
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033582 0.5kb upstream 0.5kb upstream 10345 true scaffold_7: 22837280-22847624 Theobroma cacao
Thecc1EG033582 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22837280-22837779 Theobroma cacao
Thecc1EG033582 0.5kb downstream 0.5kb downstream 10345 true scaffold_7: 22837780-22848124 Theobroma cacao
Thecc1EG033582 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22847625-22848124 Theobroma cacao
Thecc1EG033582 1.0kb upstream 1.0kb upstream 10845 true scaffold_7: 22836780-22847624 Theobroma cacao
Thecc1EG033582 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22836780-22837779 Theobroma cacao
Thecc1EG033582 1.0kb downstream 1.0kb downstream 10845 true scaffold_7: 22837780-22848624 Theobroma cacao
Thecc1EG033582 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22847625-22848624 Theobroma cacao
Thecc1EG033582 2.0kb upstream 2.0kb upstream 11845 true scaffold_7: 22835780-22847624 Theobroma cacao
Thecc1EG033582 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22835780-22837779 Theobroma cacao
Thecc1EG033582 2.0kb downstream 2.0kb downstream 11845 true scaffold_7: 22837780-22849624 Theobroma cacao
Thecc1EG033582 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22847625-22849624 Theobroma cacao
Thecc1EG033582 5.0kb upstream 5.0kb upstream 14845 true scaffold_7: 22832780-22847624 Theobroma cacao
Thecc1EG033582 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22832780-22837779 Theobroma cacao
Thecc1EG033582 5.0kb downstream 5.0kb downstream 14845 true scaffold_7: 22837780-22852624 Theobroma cacao
Thecc1EG033582 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22847625-22852624 Theobroma cacao
Thecc1EG033582 10.0kb upstream 10.0kb upstream 19845 true scaffold_7: 22827780-22847624 Theobroma cacao
Thecc1EG033582 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22827780-22837779 Theobroma cacao
Thecc1EG033582 10.0kb downstream 10.0kb downstream 19845 true scaffold_7: 22837780-22857624 Theobroma cacao
Thecc1EG033582 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22847625-22857624 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829455 5264 Brassicales-Malvales View MSA
124344940 5266 SBM View MSA
124239805 5268 Malvidae View MSA
124063460 5270 Rosid View MSA
123739745 5271 Pentapetalae View MSA
122788852 5272 Eudicot View MSA
122042200 5273 Angiosperm View MSA
121348163 5274 Embryophyte View MSA
123426103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain