Gene : Cucsa.118570 C. sativus v1.0
Defline:  (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I Genomic Order:  41
Name:  ? Cucsa.118570 Secondary Identifier:  ? PAC:16960845
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.118570 0.5kb upstream 0.5kb upstream 5224 true scaffold00998: 449512-454735 Cucumis sativus
Cucsa.118570 0.5kb upstream 0.5kb upstream 500 false scaffold00998: 449512-450011 Cucumis sativus
Cucsa.118570 0.5kb downstream 0.5kb downstream 5224 true scaffold00998: 450012-455235 Cucumis sativus
Cucsa.118570 0.5kb downstream 0.5kb downstream 500 false scaffold00998: 454736-455235 Cucumis sativus
Cucsa.118570 1.0kb upstream 1.0kb upstream 5724 true scaffold00998: 449012-454735 Cucumis sativus
Cucsa.118570 1.0kb upstream 1.0kb upstream 1000 false scaffold00998: 449012-450011 Cucumis sativus
Cucsa.118570 1.0kb downstream 1.0kb downstream 5724 true scaffold00998: 450012-455735 Cucumis sativus
Cucsa.118570 1.0kb downstream 1.0kb downstream 1000 false scaffold00998: 454736-455735 Cucumis sativus
Cucsa.118570 2.0kb upstream 2.0kb upstream 6724 true scaffold00998: 448012-454735 Cucumis sativus
Cucsa.118570 2.0kb upstream 2.0kb upstream 2000 false scaffold00998: 448012-450011 Cucumis sativus
Cucsa.118570 2.0kb downstream 2.0kb downstream 6724 true scaffold00998: 450012-456735 Cucumis sativus
Cucsa.118570 2.0kb downstream 2.0kb downstream 2000 false scaffold00998: 454736-456735 Cucumis sativus
Cucsa.118570 5.0kb upstream 5.0kb upstream 9724 true scaffold00998: 445012-454735 Cucumis sativus
Cucsa.118570 5.0kb upstream 5.0kb upstream 5000 false scaffold00998: 445012-450011 Cucumis sativus
Cucsa.118570 5.0kb downstream 5.0kb downstream 9724 true scaffold00998: 450012-459735 Cucumis sativus
Cucsa.118570 5.0kb downstream 5.0kb downstream 5000 false scaffold00998: 454736-459735 Cucumis sativus
Cucsa.118570 10.0kb upstream 10.0kb upstream 14724 true scaffold00998: 440012-454735 Cucumis sativus
Cucsa.118570 10.0kb upstream 10.0kb upstream 10000 false scaffold00998: 440012-450011 Cucumis sativus
Cucsa.118570 10.0kb downstream 10.0kb downstream 14724 true scaffold00998: 450012-464735 Cucumis sativus
Cucsa.118570 10.0kb downstream 10.0kb downstream 10000 false scaffold00998: 454736-464735 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301111 5265 Fabidae View MSA
124063460 5270 Rosid View MSA
123739745 5271 Pentapetalae View MSA
122788852 5272 Eudicot View MSA
122042200 5273 Angiosperm View MSA
121348163 5274 Embryophyte View MSA
123426103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain