Gene : Glyma.06G289700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11266:SF37 - EXPRESSED PROTEIN Genomic Order:  2897
Name:  ? Glyma.06G289700 Secondary Identifier:  ? PAC:30553591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G289700 0.5kb upstream 0.5kb upstream 5579 true Chr06: 47840529-47846107 Glycine max
Glyma.06G289700 0.5kb upstream 0.5kb upstream 500 false Chr06: 47845608-47846107 Glycine max
Glyma.06G289700 0.5kb downstream 0.5kb downstream 5579 true Chr06: 47840029-47845607 Glycine max
Glyma.06G289700 0.5kb downstream 0.5kb downstream 500 false Chr06: 47840029-47840528 Glycine max
Glyma.06G289700 1.0kb upstream 1.0kb upstream 6079 true Chr06: 47840529-47846607 Glycine max
Glyma.06G289700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47845608-47846607 Glycine max
Glyma.06G289700 1.0kb downstream 1.0kb downstream 6079 true Chr06: 47839529-47845607 Glycine max
Glyma.06G289700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47839529-47840528 Glycine max
Glyma.06G289700 2.0kb upstream 2.0kb upstream 7079 true Chr06: 47840529-47847607 Glycine max
Glyma.06G289700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47845608-47847607 Glycine max
Glyma.06G289700 2.0kb downstream 2.0kb downstream 7079 true Chr06: 47838529-47845607 Glycine max
Glyma.06G289700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47838529-47840528 Glycine max
Glyma.06G289700 5.0kb upstream 5.0kb upstream 10079 true Chr06: 47840529-47850607 Glycine max
Glyma.06G289700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47845608-47850607 Glycine max
Glyma.06G289700 5.0kb downstream 5.0kb downstream 10079 true Chr06: 47835529-47845607 Glycine max
Glyma.06G289700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47835529-47840528 Glycine max
Glyma.06G289700 10.0kb upstream 10.0kb upstream 15079 true Chr06: 47840529-47855607 Glycine max
Glyma.06G289700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47845608-47855607 Glycine max
Glyma.06G289700 10.0kb downstream 10.0kb downstream 15079 true Chr06: 47830529-47845607 Glycine max
Glyma.06G289700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47830529-47840528 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041168 5273 Angiosperm View MSA
122302208 5265 Fabidae View MSA
124060900 5270 Rosid View MSA
123751523 5271 Pentapetalae View MSA
122792564 5272 Eudicot View MSA
121344957 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4654 0.0 70.6331 High High
cufflinks 6.98045 0.0 28.4222    
cufflinks 7.29949 0.0 27.8025    
cufflinks 4.62909 0.0 15.5376    
cufflinks 5.96116 0.0 24.9504    
cufflinks 7.62799 0.0 28.0951    
cufflinks 4.35219 0.0 14.8318    
cufflinks 6.32612 0.0 26.4024    
cufflinks 5.14435 0.0 22.7232    
cufflinks 0.658        
cufflinks 0.324       Low
cufflinks 0.739        
cufflinks 0.742        
cufflinks 0.722        
cufflinks 0.341       Low
cufflinks 1.071        
cufflinks 0.308       Low
cufflinks 0.839        
cufflinks 0.858        
cufflinks 1.116       High
cufflinks 0.456        
cufflinks 1.101       High
cufflinks 1.34       High
cufflinks 0.461        
cufflinks 1.147       High
cufflinks 0.387       Low

0 Strain