Gene : Glyma.06G290100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14493:SF53 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  2901
Name:  ? Glyma.06G290100 Secondary Identifier:  ? PAC:30550453
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G290100 0.5kb upstream 0.5kb upstream 2127 true Chr06: 47897433-47899559 Glycine max
Glyma.06G290100 0.5kb upstream 0.5kb upstream 500 false Chr06: 47899060-47899559 Glycine max
Glyma.06G290100 0.5kb downstream 0.5kb downstream 2127 true Chr06: 47896933-47899059 Glycine max
Glyma.06G290100 0.5kb downstream 0.5kb downstream 500 false Chr06: 47896933-47897432 Glycine max
Glyma.06G290100 1.0kb upstream 1.0kb upstream 2627 true Chr06: 47897433-47900059 Glycine max
Glyma.06G290100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47899060-47900059 Glycine max
Glyma.06G290100 1.0kb downstream 1.0kb downstream 2627 true Chr06: 47896433-47899059 Glycine max
Glyma.06G290100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47896433-47897432 Glycine max
Glyma.06G290100 2.0kb upstream 2.0kb upstream 3627 true Chr06: 47897433-47901059 Glycine max
Glyma.06G290100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47899060-47901059 Glycine max
Glyma.06G290100 2.0kb downstream 2.0kb downstream 3627 true Chr06: 47895433-47899059 Glycine max
Glyma.06G290100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47895433-47897432 Glycine max
Glyma.06G290100 5.0kb upstream 5.0kb upstream 6627 true Chr06: 47897433-47904059 Glycine max
Glyma.06G290100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47899060-47904059 Glycine max
Glyma.06G290100 5.0kb downstream 5.0kb downstream 6627 true Chr06: 47892433-47899059 Glycine max
Glyma.06G290100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47892433-47897432 Glycine max
Glyma.06G290100 10.0kb upstream 10.0kb upstream 11627 true Chr06: 47897433-47909059 Glycine max
Glyma.06G290100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47899060-47909059 Glycine max
Glyma.06G290100 10.0kb downstream 10.0kb downstream 11627 true Chr06: 47887433-47899059 Glycine max
Glyma.06G290100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47887433-47897432 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298862 5265 Fabidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.886585 0.0 3.22548    
cufflinks 3.56741 0.0 11.2494    
cufflinks 0.947595 0.0 3.42653    
cufflinks 0.207675 0.0 0.80798 Low Low
cufflinks 64.5628 0.0 182.013 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.382       High
cufflinks 0.511       High
cufflinks 0.079     Low  
cufflinks 0.026     Low  
cufflinks 0.057        
cufflinks 0.023     Low  
cufflinks 0.02     Low  
cufflinks 0.244        
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.086        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.249        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112        

0 Strain