Gene : PhHAL.6G020500 P. hallii HAL v2.1

Defline:  (1 of 2) PTHR10836//PTHR10836:SF58 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  194
Name:  ? PhHAL.6G020500 Secondary Identifier:  ? PAC:40392770

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL ANAEROFRUCAT-PWY Panicum hallii HAL pathologic  
PhalliiHAL ANAGLYCOLYSIS-PWY Panicum hallii HAL pathologic  
PhalliiHAL GLUCONEO-PWY Panicum hallii HAL pathologic  
PhalliiHAL PWY-1042 Panicum hallii HAL pathologic  
PhalliiHAL PWY-5464 Panicum hallii HAL pathologic  
PhalliiHAL SUCSYN-PWY Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.6G020500 0.5kb upstream 0.5kb upstream 5023 true Chr06: 1489812-1494834 Panicum hallii HAL
PhHAL.6G020500 0.5kb upstream 0.5kb upstream 500 false Chr06: 1489812-1490311 Panicum hallii HAL
PhHAL.6G020500 0.5kb downstream 0.5kb downstream 5023 true Chr06: 1490312-1495334 Panicum hallii HAL
PhHAL.6G020500 0.5kb downstream 0.5kb downstream 500 false Chr06: 1494835-1495334 Panicum hallii HAL
PhHAL.6G020500 1.0kb upstream 1.0kb upstream 5523 true Chr06: 1489312-1494834 Panicum hallii HAL
PhHAL.6G020500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1489312-1490311 Panicum hallii HAL
PhHAL.6G020500 1.0kb downstream 1.0kb downstream 5523 true Chr06: 1490312-1495834 Panicum hallii HAL
PhHAL.6G020500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1494835-1495834 Panicum hallii HAL
PhHAL.6G020500 2.0kb upstream 2.0kb upstream 6523 true Chr06: 1488312-1494834 Panicum hallii HAL
PhHAL.6G020500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1488312-1490311 Panicum hallii HAL
PhHAL.6G020500 2.0kb downstream 2.0kb downstream 6523 true Chr06: 1490312-1496834 Panicum hallii HAL
PhHAL.6G020500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1494835-1496834 Panicum hallii HAL
PhHAL.6G020500 5.0kb upstream 5.0kb upstream 9523 true Chr06: 1485312-1494834 Panicum hallii HAL
PhHAL.6G020500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1485312-1490311 Panicum hallii HAL
PhHAL.6G020500 5.0kb downstream 5.0kb downstream 9523 true Chr06: 1490312-1499834 Panicum hallii HAL
PhHAL.6G020500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1494835-1499834 Panicum hallii HAL
PhHAL.6G020500 10.0kb upstream 10.0kb upstream 14523 true Chr06: 1480312-1494834 Panicum hallii HAL
PhHAL.6G020500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1480312-1490311 Panicum hallii HAL
PhHAL.6G020500 10.0kb downstream 10.0kb downstream 14523 true Chr06: 1490312-1504834 Panicum hallii HAL
PhHAL.6G020500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1494835-1504834 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122075668 5267 Panicoideae View MSA
124589376 5269 Grass View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier