Gene : Glyma.06G261600 G. max Wm82.a2.v1
Defline:  (1 of 4) PF00954//PF08276 - S-locus glycoprotein domain (S_locus_glycop) // PAN-like domain (PAN_2) Genomic Order:  2616
Name:  ? Glyma.06G261600 Secondary Identifier:  ? PAC:30552973
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G261600 0.5kb upstream 0.5kb upstream 2488 true Chr06: 44847208-44849695 Glycine max
Glyma.06G261600 0.5kb upstream 0.5kb upstream 500 false Chr06: 44847208-44847707 Glycine max
Glyma.06G261600 0.5kb downstream 0.5kb downstream 2488 true Chr06: 44847708-44850195 Glycine max
Glyma.06G261600 0.5kb downstream 0.5kb downstream 500 false Chr06: 44849696-44850195 Glycine max
Glyma.06G261600 1.0kb upstream 1.0kb upstream 2988 true Chr06: 44846708-44849695 Glycine max
Glyma.06G261600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44846708-44847707 Glycine max
Glyma.06G261600 1.0kb downstream 1.0kb downstream 2988 true Chr06: 44847708-44850695 Glycine max
Glyma.06G261600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44849696-44850695 Glycine max
Glyma.06G261600 2.0kb upstream 2.0kb upstream 3988 true Chr06: 44845708-44849695 Glycine max
Glyma.06G261600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44845708-44847707 Glycine max
Glyma.06G261600 2.0kb downstream 2.0kb downstream 3988 true Chr06: 44847708-44851695 Glycine max
Glyma.06G261600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44849696-44851695 Glycine max
Glyma.06G261600 5.0kb upstream 5.0kb upstream 6988 true Chr06: 44842708-44849695 Glycine max
Glyma.06G261600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44842708-44847707 Glycine max
Glyma.06G261600 5.0kb downstream 5.0kb downstream 6988 true Chr06: 44847708-44854695 Glycine max
Glyma.06G261600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44849696-44854695 Glycine max
Glyma.06G261600 10.0kb upstream 10.0kb upstream 11988 true Chr06: 44837708-44849695 Glycine max
Glyma.06G261600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44837708-44847707 Glycine max
Glyma.06G261600 10.0kb downstream 10.0kb downstream 11988 true Chr06: 44847708-44859695 Glycine max
Glyma.06G261600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44849696-44859695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314470 5265 Fabidae View MSA
124074659 5270 Rosid View MSA
123753273 5271 Pentapetalae View MSA
122775025 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0845965 0.0 0.364143 Low High
cufflinks 0.0582751 0.0 0.259344 Low High
cufflinks 0.0160873 0.0 0.0818875 Low  
cufflinks 0.0109968 0.0 0.0585297 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0417399 0.0 0.191194 Low  
cufflinks 0.0111926 0.0 0.0594003 Low  
cufflinks 0.0148838 0.0 0.0764122 Low  
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.042     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low High
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain