Gene : Glyma.06G319500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10551//PTHR10551:SF13 - FASCIN Genomic Order:  3195
Name:  ? Glyma.06G319500 Secondary Identifier:  ? PAC:30554027
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G319500 0.5kb upstream 0.5kb upstream 16803 true Chr06: 50828930-50845732 Glycine max
Glyma.06G319500 0.5kb upstream 0.5kb upstream 500 false Chr06: 50845233-50845732 Glycine max
Glyma.06G319500 0.5kb downstream 0.5kb downstream 16803 true Chr06: 50828430-50845232 Glycine max
Glyma.06G319500 0.5kb downstream 0.5kb downstream 500 false Chr06: 50828430-50828929 Glycine max
Glyma.06G319500 1.0kb upstream 1.0kb upstream 17303 true Chr06: 50828930-50846232 Glycine max
Glyma.06G319500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50845233-50846232 Glycine max
Glyma.06G319500 1.0kb downstream 1.0kb downstream 17303 true Chr06: 50827930-50845232 Glycine max
Glyma.06G319500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50827930-50828929 Glycine max
Glyma.06G319500 2.0kb upstream 2.0kb upstream 18303 true Chr06: 50828930-50847232 Glycine max
Glyma.06G319500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50845233-50847232 Glycine max
Glyma.06G319500 2.0kb downstream 2.0kb downstream 18303 true Chr06: 50826930-50845232 Glycine max
Glyma.06G319500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50826930-50828929 Glycine max
Glyma.06G319500 5.0kb upstream 5.0kb upstream 21303 true Chr06: 50828930-50850232 Glycine max
Glyma.06G319500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50845233-50850232 Glycine max
Glyma.06G319500 5.0kb downstream 5.0kb downstream 21303 true Chr06: 50823930-50845232 Glycine max
Glyma.06G319500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50823930-50828929 Glycine max
Glyma.06G319500 10.0kb upstream 10.0kb upstream 26303 true Chr06: 50828930-50855232 Glycine max
Glyma.06G319500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50845233-50855232 Glycine max
Glyma.06G319500 10.0kb downstream 10.0kb downstream 26303 true Chr06: 50818930-50845232 Glycine max
Glyma.06G319500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50818930-50828929 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243452 5265 Fabidae Singleton cluster - no MSA
123987966 5270 Rosid Singleton cluster - no MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.79 0.0 87.3929 High High
cufflinks 1.37367 0.0 5.83664    
cufflinks 5.63601 0.0 19.6024    
cufflinks 0.545674 0.0 2.97885   Low
cufflinks 1.84153 0.0 7.18436    
cufflinks 4.32123 0.0 13.5793    
cufflinks 0.396923 0.0 2.31597   Low
cufflinks 5.06045 0.0 17.8726    
cufflinks 6.09274 0.0 20.7924    
cufflinks 2.063        
cufflinks 18.864     High High
cufflinks 1.183        
cufflinks 1.319        
cufflinks 0.335       Low
cufflinks 1.237        
cufflinks 1.312        
cufflinks 2.204        
cufflinks 0.652        
cufflinks 0.441       Low
cufflinks 1.07        
cufflinks 15.368     High High
cufflinks 1.396        
cufflinks 1.308        
cufflinks 26.409     High High
cufflinks 0.911        
cufflinks 6.366     High  

0 Strain