Gene : Glyma.06G312900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10641//PTHR10641:SF628 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  3129
Name:  ? Glyma.06G312900 Secondary Identifier:  ? PAC:30549827
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G312900 0.5kb upstream 0.5kb upstream 5804 true Chr06: 50144641-50150444 Glycine max
Glyma.06G312900 0.5kb upstream 0.5kb upstream 500 false Chr06: 50149945-50150444 Glycine max
Glyma.06G312900 0.5kb downstream 0.5kb downstream 5804 true Chr06: 50144141-50149944 Glycine max
Glyma.06G312900 0.5kb downstream 0.5kb downstream 500 false Chr06: 50144141-50144640 Glycine max
Glyma.06G312900 1.0kb upstream 1.0kb upstream 6304 true Chr06: 50144641-50150944 Glycine max
Glyma.06G312900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50149945-50150944 Glycine max
Glyma.06G312900 1.0kb downstream 1.0kb downstream 6304 true Chr06: 50143641-50149944 Glycine max
Glyma.06G312900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50143641-50144640 Glycine max
Glyma.06G312900 2.0kb upstream 2.0kb upstream 7304 true Chr06: 50144641-50151944 Glycine max
Glyma.06G312900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50149945-50151944 Glycine max
Glyma.06G312900 2.0kb downstream 2.0kb downstream 7304 true Chr06: 50142641-50149944 Glycine max
Glyma.06G312900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50142641-50144640 Glycine max
Glyma.06G312900 5.0kb upstream 5.0kb upstream 10304 true Chr06: 50144641-50154944 Glycine max
Glyma.06G312900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50149945-50154944 Glycine max
Glyma.06G312900 5.0kb downstream 5.0kb downstream 10304 true Chr06: 50139641-50149944 Glycine max
Glyma.06G312900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50139641-50144640 Glycine max
Glyma.06G312900 10.0kb upstream 10.0kb upstream 15304 true Chr06: 50144641-50159944 Glycine max
Glyma.06G312900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50149945-50159944 Glycine max
Glyma.06G312900 10.0kb downstream 10.0kb downstream 15304 true Chr06: 50134641-50149944 Glycine max
Glyma.06G312900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50134641-50144640 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297621 5265 Fabidae View MSA
124036088 5270 Rosid View MSA
123747278 5271 Pentapetalae View MSA
122786891 5272 Eudicot View MSA
122046839 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.546348 0.0 3.25384    
cufflinks 0.306497 0.0 1.49299    
cufflinks 0.348763 0.0 1.7033    
cufflinks 0.581271 0.0 3.41241    
cufflinks 0.151052 0.0 0.746486 Low  
cufflinks 0.126254 0.0 0.491822 Low Low
cufflinks 1.7481 0.0 8.04178   High
cufflinks 0.18941 0.0 1.28516 Low  
cufflinks 0.201065 0.0 0.975211 Low  
cufflinks 0.045     Low  
cufflinks 0.007     Low Low
cufflinks 0.112     Low  
cufflinks 0.03     Low  
cufflinks 0.019     Low  
cufflinks 0.097        
cufflinks 0.1     Low  
cufflinks 0.014     Low Low
cufflinks 0.309       High
cufflinks 0.108        
cufflinks 0.129        
cufflinks 0.013     Low Low
cufflinks 0.102        
cufflinks 0.1     Low  
cufflinks 0.013     Low Low
cufflinks 0.096     Low  
cufflinks 0.016     Low  

0 Strain