Gene : PhHAL.7G192000 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR10742//PTHR10742:SF229 - AMINE OXIDASE // PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1415
Name:  ? PhHAL.7G192000 Secondary Identifier:  ? PAC:40430219

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL CHLOROPHYLL-SYN Panicum hallii HAL pathologic  
PhalliiHAL HEME-BIOSYNTHESIS-II Panicum hallii HAL pathologic  
PhalliiHAL PWY-5918 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.7G192000 0.5kb upstream 0.5kb upstream 6394 true Chr07: 34251235-34257628 Panicum hallii HAL
PhHAL.7G192000 0.5kb upstream 0.5kb upstream 500 false Chr07: 34251235-34251734 Panicum hallii HAL
PhHAL.7G192000 0.5kb downstream 0.5kb downstream 6394 true Chr07: 34251735-34258128 Panicum hallii HAL
PhHAL.7G192000 0.5kb downstream 0.5kb downstream 500 false Chr07: 34257629-34258128 Panicum hallii HAL
PhHAL.7G192000 1.0kb upstream 1.0kb upstream 6894 true Chr07: 34250735-34257628 Panicum hallii HAL
PhHAL.7G192000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34250735-34251734 Panicum hallii HAL
PhHAL.7G192000 1.0kb downstream 1.0kb downstream 6894 true Chr07: 34251735-34258628 Panicum hallii HAL
PhHAL.7G192000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34257629-34258628 Panicum hallii HAL
PhHAL.7G192000 2.0kb upstream 2.0kb upstream 7894 true Chr07: 34249735-34257628 Panicum hallii HAL
PhHAL.7G192000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34249735-34251734 Panicum hallii HAL
PhHAL.7G192000 2.0kb downstream 2.0kb downstream 7894 true Chr07: 34251735-34259628 Panicum hallii HAL
PhHAL.7G192000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34257629-34259628 Panicum hallii HAL
PhHAL.7G192000 5.0kb upstream 5.0kb upstream 10894 true Chr07: 34246735-34257628 Panicum hallii HAL
PhHAL.7G192000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34246735-34251734 Panicum hallii HAL
PhHAL.7G192000 5.0kb downstream 5.0kb downstream 10894 true Chr07: 34251735-34262628 Panicum hallii HAL
PhHAL.7G192000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34257629-34262628 Panicum hallii HAL
PhHAL.7G192000 10.0kb upstream 10.0kb upstream 15894 true Chr07: 34241735-34257628 Panicum hallii HAL
PhHAL.7G192000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34241735-34251734 Panicum hallii HAL
PhHAL.7G192000 10.0kb downstream 10.0kb downstream 15894 true Chr07: 34251735-34267628 Panicum hallii HAL
PhHAL.7G192000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34257629-34267628 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175388 5267 Panicoideae View MSA
124571496 5269 Grass View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier