Gene : Glyma.06G305700 G. max Wm82.a2.v1
Defline:  (1 of 14) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  3057
Name:  ? Glyma.06G305700 Secondary Identifier:  ? PAC:30552427
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G305700 0.5kb upstream 0.5kb upstream 10369 true Chr06: 49451501-49461869 Glycine max
Glyma.06G305700 0.5kb upstream 0.5kb upstream 500 false Chr06: 49461370-49461869 Glycine max
Glyma.06G305700 0.5kb downstream 0.5kb downstream 10369 true Chr06: 49451001-49461369 Glycine max
Glyma.06G305700 0.5kb downstream 0.5kb downstream 500 false Chr06: 49451001-49451500 Glycine max
Glyma.06G305700 1.0kb upstream 1.0kb upstream 10869 true Chr06: 49451501-49462369 Glycine max
Glyma.06G305700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49461370-49462369 Glycine max
Glyma.06G305700 1.0kb downstream 1.0kb downstream 10869 true Chr06: 49450501-49461369 Glycine max
Glyma.06G305700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49450501-49451500 Glycine max
Glyma.06G305700 2.0kb upstream 2.0kb upstream 11869 true Chr06: 49451501-49463369 Glycine max
Glyma.06G305700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49461370-49463369 Glycine max
Glyma.06G305700 2.0kb downstream 2.0kb downstream 11869 true Chr06: 49449501-49461369 Glycine max
Glyma.06G305700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49449501-49451500 Glycine max
Glyma.06G305700 5.0kb upstream 5.0kb upstream 14869 true Chr06: 49451501-49466369 Glycine max
Glyma.06G305700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49461370-49466369 Glycine max
Glyma.06G305700 5.0kb downstream 5.0kb downstream 14869 true Chr06: 49446501-49461369 Glycine max
Glyma.06G305700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49446501-49451500 Glycine max
Glyma.06G305700 10.0kb upstream 10.0kb upstream 19869 true Chr06: 49451501-49471369 Glycine max
Glyma.06G305700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49461370-49471369 Glycine max
Glyma.06G305700 10.0kb downstream 10.0kb downstream 19869 true Chr06: 49441501-49461369 Glycine max
Glyma.06G305700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49441501-49451500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296537 5265 Fabidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.6141 0.0 60.927    
cufflinks 12.0702 0.0 42.1961   Low
cufflinks 22.8078 0.0 92.2736 High High
cufflinks 21.2401 0.0 71.2414 High  
cufflinks 21.9501 0.0 86.8399 High  
cufflinks 19.6601 0.0 74.5218    
cufflinks 13.2054 0.0 40.6301   Low
cufflinks 13.1717 0.0 47.0963   Low
cufflinks 18.3033 0.0 68.4096    
cufflinks 2.845        
cufflinks 2.408        
cufflinks 5.94       High
cufflinks 5.13       High
cufflinks 4.8       High
cufflinks 2.701        
cufflinks 1.84       Low
cufflinks 3.259        
cufflinks 4.109        
cufflinks 4.118        
cufflinks 1.628       Low
cufflinks 4.116        
cufflinks 1.75       Low
cufflinks 2.25        
cufflinks 2.816        
cufflinks 1.673       Low
cufflinks 2.694        

0 Strain