Gene : Glyma.06G309500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12899:SF5 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  3095
Name:  ? Glyma.06G309500 Secondary Identifier:  ? PAC:30551957
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G309500 0.5kb upstream 0.5kb upstream 4082 true Chr06: 49800006-49804087 Glycine max
Glyma.06G309500 0.5kb upstream 0.5kb upstream 500 false Chr06: 49800006-49800505 Glycine max
Glyma.06G309500 0.5kb downstream 0.5kb downstream 4082 true Chr06: 49800506-49804587 Glycine max
Glyma.06G309500 0.5kb downstream 0.5kb downstream 500 false Chr06: 49804088-49804587 Glycine max
Glyma.06G309500 1.0kb upstream 1.0kb upstream 4582 true Chr06: 49799506-49804087 Glycine max
Glyma.06G309500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49799506-49800505 Glycine max
Glyma.06G309500 1.0kb downstream 1.0kb downstream 4582 true Chr06: 49800506-49805087 Glycine max
Glyma.06G309500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49804088-49805087 Glycine max
Glyma.06G309500 2.0kb upstream 2.0kb upstream 5582 true Chr06: 49798506-49804087 Glycine max
Glyma.06G309500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49798506-49800505 Glycine max
Glyma.06G309500 2.0kb downstream 2.0kb downstream 5582 true Chr06: 49800506-49806087 Glycine max
Glyma.06G309500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49804088-49806087 Glycine max
Glyma.06G309500 5.0kb upstream 5.0kb upstream 8582 true Chr06: 49795506-49804087 Glycine max
Glyma.06G309500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49795506-49800505 Glycine max
Glyma.06G309500 5.0kb downstream 5.0kb downstream 8582 true Chr06: 49800506-49809087 Glycine max
Glyma.06G309500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49804088-49809087 Glycine max
Glyma.06G309500 10.0kb upstream 10.0kb upstream 13582 true Chr06: 49790506-49804087 Glycine max
Glyma.06G309500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49790506-49800505 Glycine max
Glyma.06G309500 10.0kb downstream 10.0kb downstream 13582 true Chr06: 49800506-49814087 Glycine max
Glyma.06G309500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49804088-49814087 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303550 5265 Fabidae View MSA
124063068 5270 Rosid View MSA
123738575 5271 Pentapetalae View MSA
122789251 5272 Eudicot View MSA
122043633 5273 Angiosperm View MSA
121351328 5274 Embryophyte View MSA
123382121 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.26658 0.0 26.3826    
cufflinks 5.52022 0.0 17.2812   High
cufflinks 2.33829 0.0 9.27576   Low
cufflinks 4.02519 0.0 14.0797    
cufflinks 4.46824 0.0 22.5423    
cufflinks 3.27161 0.0 11.8337    
cufflinks 4.91248 0.0 16.2241    
cufflinks 4.83839 0.0 27.869    
cufflinks 3.99732 0.0 13.9412    
cufflinks 0.459        
cufflinks 0.103       Low
cufflinks 0.511        
cufflinks 0.757       High
cufflinks 0.882       High
cufflinks 0.103       Low
cufflinks 0.384        
cufflinks 0.279        
cufflinks 0.477        
cufflinks 0.73       High
cufflinks 0.303        
cufflinks 0.114       Low
cufflinks 0.409        
cufflinks 0.546        
cufflinks 0.111       Low
cufflinks 0.406        
cufflinks 0.232        

0 Strain