Gene : Glyma.07G023700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF404 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  237
Name:  ? Glyma.07G023700 Secondary Identifier:  ? PAC:30493438
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-361 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G023700 0.5kb upstream 0.5kb upstream 3666 true Chr07: 1825609-1829274 Glycine max
Glyma.07G023700 0.5kb upstream 0.5kb upstream 500 false Chr07: 1828775-1829274 Glycine max
Glyma.07G023700 0.5kb downstream 0.5kb downstream 3666 true Chr07: 1825109-1828774 Glycine max
Glyma.07G023700 0.5kb downstream 0.5kb downstream 500 false Chr07: 1825109-1825608 Glycine max
Glyma.07G023700 1.0kb upstream 1.0kb upstream 4166 true Chr07: 1825609-1829774 Glycine max
Glyma.07G023700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1828775-1829774 Glycine max
Glyma.07G023700 1.0kb downstream 1.0kb downstream 4166 true Chr07: 1824609-1828774 Glycine max
Glyma.07G023700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1824609-1825608 Glycine max
Glyma.07G023700 2.0kb upstream 2.0kb upstream 5166 true Chr07: 1825609-1830774 Glycine max
Glyma.07G023700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1828775-1830774 Glycine max
Glyma.07G023700 2.0kb downstream 2.0kb downstream 5166 true Chr07: 1823609-1828774 Glycine max
Glyma.07G023700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1823609-1825608 Glycine max
Glyma.07G023700 5.0kb upstream 5.0kb upstream 8166 true Chr07: 1825609-1833774 Glycine max
Glyma.07G023700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1828775-1833774 Glycine max
Glyma.07G023700 5.0kb downstream 5.0kb downstream 8166 true Chr07: 1820609-1828774 Glycine max
Glyma.07G023700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1820609-1825608 Glycine max
Glyma.07G023700 10.0kb upstream 10.0kb upstream 13166 true Chr07: 1825609-1838774 Glycine max
Glyma.07G023700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1828775-1838774 Glycine max
Glyma.07G023700 10.0kb downstream 10.0kb downstream 13166 true Chr07: 1815609-1828774 Glycine max
Glyma.07G023700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1815609-1825608 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041043 5273 Angiosperm View MSA
122310624 5265 Fabidae View MSA
124063767 5270 Rosid View MSA
123748181 5271 Pentapetalae View MSA
122792644 5272 Eudicot View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.63187 0.0 5.66746    
cufflinks 0.83866 0.0 3.05936    
cufflinks 3.43576 0.0 10.8936    
cufflinks 5.55221 0.0 16.4372   High
cufflinks 1.8 0.0 6.18487    
cufflinks 0.566782 0.0 2.10939   Low
cufflinks 0.326331 0.0 1.24586   Low
cufflinks 3.53863 0.0 11.1487    
cufflinks 2.39792 0.0 7.97075    
cufflinks 5.666       High
cufflinks 1.21        
cufflinks 2.204        
cufflinks 0.609        
cufflinks 0.18       Low
cufflinks 0.32       Low
cufflinks 0.55        
cufflinks 42.831     High High
cufflinks 1.627        
cufflinks 1.242        
cufflinks 0.322       Low
cufflinks 1.212        
cufflinks 0.867        
cufflinks 1.927        
cufflinks 1.415        
cufflinks 0.624        
cufflinks 3.774        

0 Strain