Gene : Glyma.07G024800 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR21596:SF3 - F16A14.2-RELATED Genomic Order:  248
Name:  ? Glyma.07G024800 Secondary Identifier:  ? PAC:30493077
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G024800 0.5kb upstream 0.5kb upstream 1906 true Chr07: 1943863-1945768 Glycine max
Glyma.07G024800 0.5kb upstream 0.5kb upstream 500 false Chr07: 1945269-1945768 Glycine max
Glyma.07G024800 0.5kb downstream 0.5kb downstream 1906 true Chr07: 1943363-1945268 Glycine max
Glyma.07G024800 0.5kb downstream 0.5kb downstream 500 false Chr07: 1943363-1943862 Glycine max
Glyma.07G024800 1.0kb upstream 1.0kb upstream 2406 true Chr07: 1943863-1946268 Glycine max
Glyma.07G024800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1945269-1946268 Glycine max
Glyma.07G024800 1.0kb downstream 1.0kb downstream 2406 true Chr07: 1942863-1945268 Glycine max
Glyma.07G024800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1942863-1943862 Glycine max
Glyma.07G024800 2.0kb upstream 2.0kb upstream 3406 true Chr07: 1943863-1947268 Glycine max
Glyma.07G024800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1945269-1947268 Glycine max
Glyma.07G024800 2.0kb downstream 2.0kb downstream 3406 true Chr07: 1941863-1945268 Glycine max
Glyma.07G024800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1941863-1943862 Glycine max
Glyma.07G024800 5.0kb upstream 5.0kb upstream 6406 true Chr07: 1943863-1950268 Glycine max
Glyma.07G024800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1945269-1950268 Glycine max
Glyma.07G024800 5.0kb downstream 5.0kb downstream 6406 true Chr07: 1938863-1945268 Glycine max
Glyma.07G024800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1938863-1943862 Glycine max
Glyma.07G024800 10.0kb upstream 10.0kb upstream 11406 true Chr07: 1943863-1955268 Glycine max
Glyma.07G024800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1945269-1955268 Glycine max
Glyma.07G024800 10.0kb downstream 10.0kb downstream 11406 true Chr07: 1933863-1945268 Glycine max
Glyma.07G024800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1933863-1943862 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238608 5265 Fabidae Singleton cluster - no MSA
123983999 5270 Rosid Singleton cluster - no MSA
123753047 5271 Pentapetalae View MSA
122797032 5272 Eudicot View MSA
122049313 5273 Angiosperm View MSA
121351594 5274 Embryophyte View MSA
123382240 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.747607 0.0 2.85548    
cufflinks 4.51008 0.0 15.3705   High
cufflinks 0.878909 0.0 3.32439    
cufflinks 3.32918 0.0 11.6308   High
cufflinks 0.820702 0.0 3.11905    
cufflinks 0.556006 0.0 2.15227    
cufflinks 5.35334 0.0 17.8988   High
cufflinks 0.75495 0.0 2.87708    
cufflinks 0.590165 0.0 2.2768    
cufflinks 0.464        
cufflinks 0.014     Low Low
cufflinks 2.398        
cufflinks 0.394        
cufflinks 0.913        
cufflinks 0.028     Low Low
cufflinks 1.836        
cufflinks 0.031     Low Low
cufflinks 5.607       High
cufflinks 2.843        
cufflinks 1.813        
cufflinks 0.03     Low Low
cufflinks 1.981        
cufflinks 2.524        
cufflinks 0.014     Low Low
cufflinks 1.943        
cufflinks 0.055     Low  

0 Strain