Gene : Glyma.07G025300 G. max Wm82.a2.v1
Defline:  (1 of 26) PTHR10042 - EARLY GROWTH RESPONSE PROTEIN-RELATED Genomic Order:  253
Name:  ? Glyma.07G025300 Secondary Identifier:  ? PAC:30492348
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G025300 0.5kb upstream 0.5kb upstream 2023 true Chr07: 1983547-1985569 Glycine max
Glyma.07G025300 0.5kb upstream 0.5kb upstream 500 false Chr07: 1983547-1984046 Glycine max
Glyma.07G025300 0.5kb downstream 0.5kb downstream 2023 true Chr07: 1984047-1986069 Glycine max
Glyma.07G025300 0.5kb downstream 0.5kb downstream 500 false Chr07: 1985570-1986069 Glycine max
Glyma.07G025300 1.0kb upstream 1.0kb upstream 2523 true Chr07: 1983047-1985569 Glycine max
Glyma.07G025300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1983047-1984046 Glycine max
Glyma.07G025300 1.0kb downstream 1.0kb downstream 2523 true Chr07: 1984047-1986569 Glycine max
Glyma.07G025300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1985570-1986569 Glycine max
Glyma.07G025300 2.0kb upstream 2.0kb upstream 3523 true Chr07: 1982047-1985569 Glycine max
Glyma.07G025300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1982047-1984046 Glycine max
Glyma.07G025300 2.0kb downstream 2.0kb downstream 3523 true Chr07: 1984047-1987569 Glycine max
Glyma.07G025300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1985570-1987569 Glycine max
Glyma.07G025300 5.0kb upstream 5.0kb upstream 6523 true Chr07: 1979047-1985569 Glycine max
Glyma.07G025300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1979047-1984046 Glycine max
Glyma.07G025300 5.0kb downstream 5.0kb downstream 6523 true Chr07: 1984047-1990569 Glycine max
Glyma.07G025300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1985570-1990569 Glycine max
Glyma.07G025300 10.0kb upstream 10.0kb upstream 11523 true Chr07: 1974047-1985569 Glycine max
Glyma.07G025300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1974047-1984046 Glycine max
Glyma.07G025300 10.0kb downstream 10.0kb downstream 11523 true Chr07: 1984047-1995569 Glycine max
Glyma.07G025300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1985570-1995569 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310581 5265 Fabidae View MSA
124070347 5270 Rosid View MSA
123745307 5271 Pentapetalae View MSA
122786799 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.443956 0.0 1.67048    
cufflinks 1.63291 0.0 5.65637   High
cufflinks 0.385019 0.0 1.45683    
cufflinks 0.968503 0.0 3.49018    
cufflinks 0.752031 0.0 2.75605    
cufflinks 0.908995 0.0 3.29281    
cufflinks 0.390699 0.0 1.47885    
cufflinks 2.14192 0.0 7.18181   High
cufflinks 0.265307 0.0 1.02048   Low
cufflinks 1.654       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.292        
cufflinks 0.301        
cufflinks 0.367        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.25        
cufflinks 0.089        
cufflinks 0.49        
cufflinks 0.919       High
cufflinks 0.106        
cufflinks 0.032     Low Low
cufflinks 0.124        
cufflinks 0.312        
cufflinks 0.025     Low Low
cufflinks 0.232        
cufflinks 0.025     Low Low

0 Strain